Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1944 ATGATGCTGTTGCTGTTCCGGTATCAAACAAAACAAAATTTCTTATTCATTTTATTATTTTTTTCCCTTTCACCCTATCAAACTCCCACTTCCTCTGCATCTCCTCTTATTTCCTCACAAACCCAGTTTTGTTTCACAAAAAAGATCACAACTTTGCTTCGTTTCTTTCATGGGCTGATCTTAGGAACCATAGACACCGCACCGCACATGGACAAGTCCCACAGTTTTCTTCAGAGTCTCGTAAAACATTTCAAATTCGGTTCCAGTAAAGAGCGAAACAATGAAGCTGACTTGAAGCAAATGGCTGCTCAGGAGCAGAAGCTCTTTGCCTATGAAACATTGCTTGCAGCTACCAAGAATTTCAGTTCTATTAATAAGCTTGGTGAGGGAGGGTTTGGACCCGTCTACAAGGGGAAGCTAAATGATGGGAGAGAGGTTGCAGTGAAGAAGCTATCACACACCTCAAATCAAGGGAAGAAAGAGTTCACGAATGAGGCCAAGTTGTTGGCTCGTGTGCAGCACCGGAATGTGGTGAATTTGTTGGGTTATTGTGCACATGGCACAGAGAAGCTGCTTGTTTATGAGTATGTGCCTCATGAGAGCCTTGACAAGCTTCTATTCAAACCACACAGGAGAAATCAGCTTGATTGGAAGCGCAGGTTTGGCATAATCACAGGCGTGGCAAAGGGCTTGCTTTATCTCCATGAGGACTCGCACCATTGCATCATCCACCGAGACATCAAGGCTAGTAACATCTTGCTTGATGACAAGTGGCAACCCAAGATTGCTGACTTTGGCATGGCCCGTCTCTTCCCGGAAGATCAAACCCAGGTCAATACTCGTGTGGCTGGAACCAACGGATATATGGCTCCTGAATATGTGATGCATGGACAGCTGTCGGTGAAGGCTGACGTGTTTAGCTTCGGGGTTTTGGTGTTGGAGTTGATCAGCGGCCAACGAAACTCGTCCTTTAATTTGGATGTGGATGCCGTGAATCTACTTGACTGGACATACAAGCTGTACAAGAAAGCGAGGAGTCTGGAAATCGTGGATTCATCATTAGCATCTACGATGGAAGTTGAACAAGTAGCAATGTGCATTCAGCTGGGTCTGCTATGCACGCAGGGCGATCCACAACTGCGCCCCAACATGAGGCGCGTGGTGGTGATGCTGTCTAGGAAGCCAGGTCACATGGAAGAACCTACGAGACCAGGGGTGGCTGGTTCCAGATACAGGAGACCTCGGAGGCACAGCACTGCAGGGATGTCCTCCACTGCTGGTACCTCCGGGGCCTCCGATTCGCATACTTCTGATTCGAGCAACAACAACACCACTGTTTCTGTTTCTGCTTCTGCTTCTACTGCTACTGTTACTGCTGCTACTACTGCTACGGCAACTACTTCAGGTCGTGCTAGAGAATCATCCGACCCCAAGGGGAAACGTCCAATGAAGGGTTAG 1458 0.476 MMLLLFRYQTKQNFLFILLFFSLSPYQTPTSSASPLISSQTQFCFTKKITTLLRFFHGLILGTIDTAPHMDKSHSFLQSLVKHFKFGSSKERNNEADLKQMAAQEQKLFAYETLLAATKNFSSINKLGEGGFGPVYKGKLNDGREVAVKKLSHTSNQGKKEFTNEAKLLARVQHRNVVNLLGYCAHGTEKLLVYEYVPHESLDKLLFKPHRRNQLDWKRRFGIITGVAKGLLYLHEDSHHCIIHRDIKASNILLDDKWQPKIADFGMARLFPEDQTQVNTRVAGTNGYMAPEYVMHGQLSVKADVFSFGVLVLELISGQRNSSFNLDVDAVNLLDWTYKLYKKARSLEIVDSSLASTMEVEQVAMCIQLGLLCTQGDPQLRPNMRRVVVMLSRKPGHMEEPTRPGVAGSRYRRPRRHSTAGMSSTAGTSGASDSHTSDSSNNNTTVSVSASASTATVTAATTATATTSGRARESSDPKGKRPMKG* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1944 485 MobiDBLite consensus disorder prediction 392 485 - -
Dod04g1944 485 ProSitePatterns Serine/Threonine protein kinases active-site signature. 242 254 IPR008271 GO:0004672|GO:0006468
Dod04g1944 485 ProSiteProfiles Protein kinase domain profile. 121 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g1944 485 PANTHER RECEPTOR-LIKE KINASE 72 447 - -
Dod04g1944 485 MobiDBLite consensus disorder prediction 418 472 - -
Dod04g1944 485 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 72 447 - -
Dod04g1944 485 Pfam Protein tyrosine and serine/threonine kinase 124 390 IPR001245 GO:0004672|GO:0006468
Dod04g1944 485 SMART serkin_6 121 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g1944 485 Gene3D Phosphorylase Kinase; domain 1 83 196 - -
Dod04g1944 485 Gene3D Transferase(Phosphotransferase) domain 1 197 402 - -
Dod04g1944 485 SUPERFAMILY Protein kinase-like (PK-like) 106 400 IPR011009 -
Dod04g1944 485 CDD STKc_IRAK 127 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1944 Dod-Chr4 42687816 42692280 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1944 109 407 Receptor kinase-like Gene Family AT4G11530 52.824 4.95e-112 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dod04g1944 PK_Tyr_Ser-Thr 1.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1944 - - gmx:100795769 629.787