Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1890 ATGGCCAACAGAGTTCAAATTCCTACAAGCAATTCAGCACTTATTGCCATGATTGCAGATGAGGATACTGTAGTTGGGTTTCTGTTGGCTGGAGTGGGAAATGTTGACTTGCGTAGAAAGACAAATTACCTCATTGTGGATTCAAAAACAACTGTAAAACAAATTGAGGATGCATTCAAAGAATTCACAACAAGGGAGGATATTGCAATTGTGCTGATTAGCCAATATGTTGCGAATATGATAAGGTTTCTGGTTGATAGTTATAACAAGCCCGTTCCTGCAATACTTGAAATCCCTTCTAAAGACCATCCTTATGATCCCGCACATGATTCGGTTCTTTCCCGAGTAAAGTATCTCTTTTCTGCCGAATCAGTGGCATCTGGGAGACGCTGA 393 0.4071 MANRVQIPTSNSALIAMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVLISQYVANMIRFLVDSYNKPVPAILEIPSKDHPYDPAHDSVLSRVKYLFSAESVASGRR* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1890 130 Pfam ATP synthase (F/14-kDa) subunit 15 116 IPR008218 GO:0034220|GO:0046961
Dod04g1890 130 Gene3D ATPase, V1 complex, subunit F 9 122 IPR036906 GO:0034220
Dod04g1890 130 TIGRFAM V_ATP_synt_F: V-type ATPase, F subunit 11 124 IPR005772 GO:0033180|GO:0046961|GO:1902600
Dod04g1890 130 PANTHER V-TYPE PROTON ATPASE SUBUNIT F 1 130 - -
Dod04g1890 130 PIRSF V-ATP_synth_F 3 123 IPR005772 GO:0033180|GO:0046961|GO:1902600
Dod04g1890 130 SUPERFAMILY AtpF-like 15 99 IPR036906 GO:0034220
Dod04g1890 130 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT F 1 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1890 Dod-Chr4 41979105 41982054 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1890 1 126 Primary Pumps ATPases(2) AT4G02620 88.095 1.11e-81 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1890 K02151 - gmx:100305531 248.054