Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1881 ATGAGGATTTCAACACTTGCACTAGTTGTGCTCCTCTTGTGCTTTTCTTCTCCCATGATCATAATAGCCCTTGGCCATGGCAACATGGACAGTGACACAACTTTGAGAGTGCTTTTGGAAGTGAAGAAGTCTTTTGATCAAGACCCACAAGACGTTTTGAGTGATTGGTCGGAGACCAACACAGACTACTGTAGTTGGAGAGGTGTATCATGTGGATCATTGAACTCGGACTCAAACTCGGTGCAAGTGGTGGGCCTCAACCTTTCTGACTCGTCACTCACCGGGTCAATATCACCCTCACTCGGTCTGTTACAAAACCTGCTCCACCTTGATCTCTCATCCAACAGCCTCACGGGTCCCATTCCACCTAACCTCTCCAACCTCACTTCATTGGAATCTTTGCTTCTCTTCTCTAACCAACTCACAGGTCACGTCCCCACTGAGTTTGGCTCACTCACGAGTCTCCGAGTCATGCGACTCGGTGACAACGAACTAACTGGCACGATTCCCGCGTCTCTTGGGAACCTTGTCAACCTGGTCAACCTTGGTTTGGCTTCATGCAGACTCACCGGGTCGATTCCACCTCAACTCGGTCGACTCAGCCGCATGCAGAATCTGATACTGCAGGACAACGACTTGATGGGACCGATTCCGAGCGAGTTGGGGAACTGCACAAGCCTCACCGTCTTCACTGCAGCTAACAACATGCTCAATGGCTCAGTCCCGAGTGAACTGAGTCAACTCAAGAGCCTCCAAATCTTCAACCTCGCCAACAACAACCTGTCAGGGGAGATTCCGAGTCAACTCGGTGAGATGAGTGAACTCGTTTACCTGAATTTCATGGGGAACCAACTTGACGGTGCTGTTCCACCGTCTCTAGCTCAACTGGGTAGCCTTCAAAATCTGGACTTGTCCATGAACAAGCTCAGTGGAGGGGTTCCAGAGGAGTTAGGAAACATGGGTCAGTTAGCTTTCATGGTTCTGTCTGGTAACAACCTTAATGGTGTCATACCAAGAAACATTTGTTCCAATGCAACTAGTTTGGAGCATATGATGCTGTCAGATTGTGGACTCCATGGTGAGATTCCAGCTGAGCTGAGCCAATGCCAGTCACTGAAACAACTTGATTTGTCCAACAACTCACTCAATGGGTCCATTCCTCTTGAGCTTTATGGGTTGCTGGGGTTAACTGATCTCTTGCTCAACAACAACAGCTTGGTTGGTTCCATCTCTCCATTCATTGGAAACCTCAGTAACTTGCAGACACTTGCTTTGTTTCACAACAATTTGCAGGGTGCTCTGCCAAAAGAGATTGGAATGCTTGGCCAGTTGGAAATTTTGTATCTTTATGATAATCAGTTGTCAGGAGCTATACATATGGAGATTGGTAATTGTTCTAGCTTGCAGATGATTGATTTCTTCGGAAACCATTTCAGTGGGGAAATTCCCATCACTATTGGAAGGCTGAAGGAGTTGAATTTCCTTCACCTTAGGCAGAATGAGCTTGTGGGTGAAATTCCTGCCACACTGGGTAACTGTCTTAAGCTGAATATCCTGGATTTGGCAGACAATCAGCTCTCAGGGGGCATTCCTACAACATTTGGATTCCTTGAGGCCTTGCAGCAACTCATGCTCTACAATAATTCTCTTGAAGGTAACCTCCCTCACCAACTGGTAAATGCAGCAAACTTGACCAGAGTGAATCTTTCAAAGAATAGATTGAATGGAAGTATAGCTGCACTGTGTAGCTCTCGATCGTTTCTCTCTTTTGATGTCACGAACAATGCTTTTGATGGAGAAATTCCTCCCCAATTAGGAAATTCACCCTCACTTGAGAGGATAAGATTAGGTGACAATAAATTTTCTGGTGAAATTCCAAGGGCATTGGGAAAAATCCATGAATTGATATTGTTAGACCTCTCAGGAAATTCACTCACCGGACCAATACCAGGTGAGCTTTCTTTGTGCAATAAACTGGCTTACATTGATTTACACAGTAACTTCCTTTCTGGACAAATACCACCATGGCTTGGAAGTTTGCCTCAGCTGGGAGAGCTTAAGCTTTCCTTCAATAACTTTTCTGGTCCTCTTCCATTAGGCCTTTTCAAATGTTCCAAATTGCTAGTTCTCAACCTAAATGACAATTCTCTCAATGGAAGTCTCCCAGCCGATATTGGTGATCTTGCATCCCTTAATGTCCTAAGACTTGGCCATAATAACTTATCTGGACCAATATCTGAGGCAATAAGTAAGTTGAGCAAGCTTTATGAGCTCCAGCTATCAAGAAATAGCTTTAATGGTGAGGTGCCAACTGAGATTGGAAAACTCCAAAATCTCCAAATCATTTTAGACCTCAGTTACAATAATCTCTCAGGTCAAATCCCACCTTCTCTTGGGTCATTGTCAAAATTAGAAGCACTAGATCTTTCCCACAATCAACTCAGTGGAGAAGTCCCTCCACAAGTTGGTGAAATGAGCAGCTTGGGAAAGCTTGATCTCTCTTACAACAACCTTGAGGGAAAATTGGACAAGAAATTCTCCCACTGGCCAGATGAGGCATTTGAAGGGAACCTACAACTTTGTGGAAGTCCTCTTGGGCGTTGCAACGGTGGTGATACTTCTGGAGGTGAGAAATCAGGCCTAAGTGAGTTGTCAGTAGTGGTTATCTCTGCAACTTCAACTCTAGCAGTCATTGCACTAATAATACTTGCATTGAGAATCTTCAAAAACAAGCAAGAAATTTCCAGGAAAGGCAGTGGAGTGAATTATACATACTCCTCATCTTCATCACAAGTACAGCGAAGGCCACTGTTTCAACCAAATGCTGCTGGAAAGAGAGATTTCCGATGGGAAGATATCATGGAAGCCACGAAAAATCTAAGTGATAGCTTCAAGATTGGTTCAGGAGGCTCAGGGACAATCTACAAAGCTGAATTGGCCACTGGAGAGACAGTGGCTGTCAAGAAGATTTCATCAAAAGATGATTTTCTGTTAAATAAAAGCTTCATAAGAGAAGTTAAGACACTTGGGAGGACCAGGCATAGACATCTGGTGAAGCTGATTGGTTATTGTACCAATGCAAACAAAGGAGCAGGTTGGAATCTGTTGATATATGAGTACATGGAGAATGGGAGTCTATGGGACTGGCTTCATGGGAAACCAGCCAAGGCCAGTAAAGTAAAGAGGAGCCTTGATTGGGAGACAAGGTTCAAAATTGCTGTGGGATTAGCTCAGGGAGTGGAATACCTCCATCATGATTGTGTGCCAAAGATCATTCACAGGGACATCAAATCCAGCAACATATTGCTAGATTCCAAAATGGAGGCACACTTGGGAGATTTTGGACTGGCAAAACCACTCACTGAGAATTATGACTCCAATACTGAGTCTAATTCTTGGTTTGCTGGCTCTTATGGCTACATAGCTCCAGAGTATGCATACTCTCTACATGCAACAGAGAAAAGTGATGTTTACAGCATGGGAATTGTGCTCATGGAAGTTGTTAGTGGCAAAATGCCAACAGATGACACTTTCGGAGCAGAGATGGACATGGTGAGATGGGTGGAGATGCACATTGATATGCATGGCACTGCGCGTGAGGAATTGATAGATCCTGAGCTGAAACCTCTTTTGCCTGGTGAAGAGTTTGCTGCATTCCAGGTGCTTGAGATAGCCTTACAGTGCACCAAAACTACACCCCAGGAGAGGCCAACTTCGAGGAAAGTCTGTGATCTTCTCCTTCATGTTTTCAACAACAGAATGGCGGGGTTCGATAAGATGAATTTGGACCATTACAGGAGAACTTAA 3807 0.446 MRISTLALVVLLLCFSSPMIIIALGHGNMDSDTTLRVLLEVKKSFDQDPQDVLSDWSETNTDYCSWRGVSCGSLNSDSNSVQVVGLNLSDSSLTGSISPSLGLLQNLLHLDLSSNSLTGPIPPNLSNLTSLESLLLFSNQLTGHVPTEFGSLTSLRVMRLGDNELTGTIPASLGNLVNLVNLGLASCRLTGSIPPQLGRLSRMQNLILQDNDLMGPIPSELGNCTSLTVFTAANNMLNGSVPSELSQLKSLQIFNLANNNLSGEIPSQLGEMSELVYLNFMGNQLDGAVPPSLAQLGSLQNLDLSMNKLSGGVPEELGNMGQLAFMVLSGNNLNGVIPRNICSNATSLEHMMLSDCGLHGEIPAELSQCQSLKQLDLSNNSLNGSIPLELYGLLGLTDLLLNNNSLVGSISPFIGNLSNLQTLALFHNNLQGALPKEIGMLGQLEILYLYDNQLSGAIHMEIGNCSSLQMIDFFGNHFSGEIPITIGRLKELNFLHLRQNELVGEIPATLGNCLKLNILDLADNQLSGGIPTTFGFLEALQQLMLYNNSLEGNLPHQLVNAANLTRVNLSKNRLNGSIAALCSSRSFLSFDVTNNAFDGEIPPQLGNSPSLERIRLGDNKFSGEIPRALGKIHELILLDLSGNSLTGPIPGELSLCNKLAYIDLHSNFLSGQIPPWLGSLPQLGELKLSFNNFSGPLPLGLFKCSKLLVLNLNDNSLNGSLPADIGDLASLNVLRLGHNNLSGPISEAISKLSKLYELQLSRNSFNGEVPTEIGKLQNLQIILDLSYNNLSGQIPPSLGSLSKLEALDLSHNQLSGEVPPQVGEMSSLGKLDLSYNNLEGKLDKKFSHWPDEAFEGNLQLCGSPLGRCNGGDTSGGEKSGLSELSVVVISATSTLAVIALIILALRIFKNKQEISRKGSGVNYTYSSSSSQVQRRPLFQPNAAGKRDFRWEDIMEATKNLSDSFKIGSGGSGTIYKAELATGETVAVKKISSKDDFLLNKSFIREVKTLGRTRHRHLVKLIGYCTNANKGAGWNLLIYEYMENGSLWDWLHGKPAKASKVKRSLDWETRFKIAVGLAQGVEYLHHDCVPKIIHRDIKSSNILLDSKMEAHLGDFGLAKPLTENYDSNTESNSWFAGSYGYIAPEYAYSLHATEKSDVYSMGIVLMEVVSGKMPTDDTFGAEMDMVRWVEMHIDMHGTAREELIDPELKPLLPGEEFAAFQVLEIALQCTKTTPQERPTSRKVCDLLLHVFNNRMAGFDKMNLDHYRRT* 1269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1881 1268 Pfam Leucine rich repeat 754 814 IPR001611 GO:0005515
Dod04g1881 1268 PRINTS Leucine-rich repeat signature 801 814 - -
Dod04g1881 1268 PRINTS Leucine-rich repeat signature 372 385 - -
Dod04g1881 1268 SUPERFAMILY L domain-like 588 843 - -
Dod04g1881 1268 Gene3D Ribonuclease Inhibitor 406 533 IPR032675 -
Dod04g1881 1268 SUPERFAMILY L domain-like 44 387 - -
Dod04g1881 1268 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 12 1262 - -
Dod04g1881 1268 Pfam Leucine rich repeat N-terminal domain 36 71 IPR013210 -
Dod04g1881 1268 Gene3D Ribonuclease Inhibitor 195 405 IPR032675 -
Dod04g1881 1268 Gene3D Ribonuclease Inhibitor 535 872 IPR032675 -
Dod04g1881 1268 Gene3D Transferase(Phosphotransferase) domain 1 1041 1262 - -
Dod04g1881 1268 Pfam Leucine Rich Repeat 106 128 IPR001611 GO:0005515
Dod04g1881 1268 SMART serkin_6 960 1251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g1881 1268 ProSiteProfiles Protein kinase domain profile. 960 1251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g1881 1268 Pfam Protein kinase domain 964 1243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g1881 1268 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE GSO1 12 1262 - -
Dod04g1881 1268 SUPERFAMILY L domain-like 313 649 - -
Dod04g1881 1268 ProSitePatterns Protein kinases ATP-binding region signature. 966 989 IPR017441 GO:0005524
Dod04g1881 1268 SUPERFAMILY Protein kinase-like (PK-like) 942 1246 IPR011009 -
Dod04g1881 1268 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1091 1103 IPR008271 GO:0004672|GO:0006468
Dod04g1881 1268 Gene3D Phosphorylase Kinase; domain 1 919 1040 - -
Dod04g1881 1268 SMART LRR_typ_2 825 856 IPR003591 -
Dod04g1881 1268 SMART LRR_typ_2 128 151 IPR003591 -
Dod04g1881 1268 SMART LRR_typ_2 728 751 IPR003591 -
Dod04g1881 1268 SMART LRR_typ_2 489 513 IPR003591 -
Dod04g1881 1268 SMART LRR_typ_2 752 776 IPR003591 -
Dod04g1881 1268 SMART LRR_typ_2 152 176 IPR003591 -
Dod04g1881 1268 SMART LRR_typ_2 680 704 IPR003591 -
Dod04g1881 1268 SMART LRR_typ_2 441 465 IPR003591 -
Dod04g1881 1268 SMART LRR_typ_2 296 320 IPR003591 -
Dod04g1881 1268 SMART LRR_typ_2 537 561 IPR003591 -
Dod04g1881 1268 SMART LRR_typ_2 104 127 IPR003591 -
Dod04g1881 1268 SMART LRR_typ_2 417 440 IPR003591 -
Dod04g1881 1268 SMART LRR_typ_2 369 393 IPR003591 -
Dod04g1881 1268 SMART LRR_typ_2 801 823 IPR003591 -
Dod04g1881 1268 SMART LRR_typ_2 248 272 IPR003591 -
Dod04g1881 1268 Gene3D Ribonuclease Inhibitor 32 194 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1881 Dod-Chr4 41760720 41764930 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1881 46 698 Receptor kinase-like Gene Family AT1G73080 34.949 3.65e-94 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dod04g1881 Pkinase 8.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1881 - - gmx:100801889 2026.14