Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1880 ATGTCCAACTATTCCTATTCATTACTCATTCTTTTGCTTCTTTACACCATTTTAGCCTCAGCACATCCTCCTGAAGATCATGATGAGCCTCCATTACTTACTTCCTCCTCCCCAGGGGATACTATCTACACTCTCAAAGTCCCAAAGTTAGAGGAAACCATCTTGGACAGTCTCCTATCCTTCGGTTACTACCAGAAAAGCTGTCCACAATTCGAATCCATCCTTCACAGCAAGGTCAAACAATGGATTCAAAAGGATTATTCTTTAGCTGCCAGTCTTCTGAGGGTGCATTTTCATGATTGCTCTGTCAGGGGATGTGATGCCTCCATTCTTTTGAACCATGATGGAAGTGAGAGGACAGCACATGCAAGCAAGACACTGAGAGGGTTCGAGGCGATTGATGATATCAAGTCAGAGCTGGAGAAGCATTGCCCCAGGACAGTTTCATGTGCAGACATTCTGACAGCAGCTACAAGTGATGCCACCGTTGAGATGGGTGGTCCATATTGGGCAGTCCCCTATGGCAGGAAAGATGGGCTGGCCTCCATTGCCAAGGAAGCTGAAATGGTTCCCATGGGCCATGAAAACATCACTTCCTTGCTTGAACTTCTCCAATCCAAAGGCCTCACTGTGCTTGACTTAGTTGTTCTCTCAGGGACTTATACTATTGGAAGGGCTTCGTGTGGATCCATCCAATATAGGCTATACAACTACCAAGGAACTGGGAAACCGGACCCATCCATAGATCCAGAGTATCTCAACTTCCTACAAAGAAAGTGTAGATGGGCTTCAGGTTATGTAGACATTGATGCTACAACGCCAAGGGACTTTGATTTTGTGTATTATAGAAATCTCAAGAAGAATATGGGGTTGTTATCCACGGATCAGTTGTTATATTCTCATCCGAGGACTTCTCCCATTGTTTCTGCATTAGCTGCCGCAACCTACATTTTCAAGCACCAGTTTGCGGTGTCCATGGCAAAGCTTGGCAATGTTGAAGTTCTCACGGGCCAGGATGAAGGGGAAATTAGGACCAACTGTAATTATGTCAATGCTTATTGA 1062 0.451 MSNYSYSLLILLLLYTILASAHPPEDHDEPPLLTSSSPGDTIYTLKVPKLEETILDSLLSFGYYQKSCPQFESILHSKVKQWIQKDYSLAASLLRVHFHDCSVRGCDASILLNHDGSERTAHASKTLRGFEAIDDIKSELEKHCPRTVSCADILTAATSDATVEMGGPYWAVPYGRKDGLASIAKEAEMVPMGHENITSLLELLQSKGLTVLDLVVLSGTYTIGRASCGSIQYRLYNYQGTGKPDPSIDPEYLNFLQRKCRWASGYVDIDATTPRDFDFVYYRNLKKNMGLLSTDQLLYSHPRTSPIVSALAAATYIFKHQFAVSMAKLGNVEVLTGQDEGEIRTNCNYVNAY* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1880 353 PRINTS Haem peroxidase superfamily signature 90 104 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dod04g1880 353 PRINTS Haem peroxidase superfamily signature 148 165 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dod04g1880 353 PRINTS Haem peroxidase superfamily signature 166 178 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dod04g1880 353 PRINTS Haem peroxidase superfamily signature 270 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dod04g1880 353 PRINTS Haem peroxidase superfamily signature 213 228 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dod04g1880 353 CDD secretory_peroxidase 59 350 IPR033905 GO:0004601|GO:0042744
Dod04g1880 353 PANTHER PEROXIDASE 25-RELATED 47 350 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod04g1880 353 PANTHER PEROXIDASE 47 350 - -
Dod04g1880 353 Gene3D - 62 351 - -
Dod04g1880 353 ProSitePatterns Peroxidases active site signature. 90 101 IPR019794 GO:0004601
Dod04g1880 353 Gene3D Peroxidase, domain 2 191 329 - -
Dod04g1880 353 SUPERFAMILY Heme-dependent peroxidases 59 351 IPR010255 GO:0004601|GO:0006979|GO:0020037
Dod04g1880 353 ProSiteProfiles Plant heme peroxidase family profile. 58 351 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dod04g1880 353 Pfam Peroxidase 77 313 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dod04g1880 353 PRINTS Plant peroxidase signature 166 181 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod04g1880 353 PRINTS Plant peroxidase signature 212 224 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod04g1880 353 PRINTS Plant peroxidase signature 284 301 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod04g1880 353 PRINTS Plant peroxidase signature 92 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod04g1880 353 PRINTS Plant peroxidase signature 147 157 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod04g1880 353 PRINTS Plant peroxidase signature 324 337 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod04g1880 353 PRINTS Plant peroxidase signature 68 87 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod04g1880 353 PRINTS Plant peroxidase signature 128 141 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod04g1880 353 PRINTS Plant peroxidase signature 268 283 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1880 Dod-Chr4 41753195 41754848 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1880 55 352 Peroxidase AT1G30870 59.667 2.18e-127 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1880 K00430 - gmx:100527587 546.969