Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1878 ATGAGTTCACTGCCACCACACTCAGTTGGCACTTGCCTCTGTTCACTGCAACCCCAAAAAAGCAGCTACTCATCATCCTCACCACCTGCTGTATTCTCTTCCACTTCCACTATTCAGTATCATCATCTCAAAACCTATGCTGTCCATCCACATCCACCATTAGCAATTGCACTCCTTCCACAAAGTGAGAGCGAGAGTAAGAGCAACCCCACCACCCACTTCAAGAGAAGAGATGCATTAGGCCTTGCCTTGAGTTTTGGCCTTCTTCATCCCTTCTTTCAACCACCACAGCCATCATCAGCAGCAACTGATACCACAGCTCCATGTGAATTCACAGTAGCTCCTTCAGGCCTTGCATTTTGTGATAAACTTGTTGGAACCGGTCCTCAGGCTCTCAAGGGGCAGCTTATTAAGGCACATTATGTTGGGAGATTGGAGAGTGGGAAAATTTTCGACAGCAGCTATAATCGTGGCAAGCCACTCACATTCCGTGTCGGTGTTGGAGAGGTCATCAAAGGATGGGATGAAGGCATTTTAGGTGGTGATGGAGTTCCTCCCATGCTTGCAGGAGGGAAACGTACATTGAAGCTTCCCCCGGAACTCGGATATGGCTCGAGAGGGGCTGGTTGTAGAGGAGGTTCATGTATCATTCCTCCTGATTCAGTCCTCTTATTCGATGTGGAGTTCATTAGCAAAGCATGA 702 0.4815 MSSLPPHSVGTCLCSLQPQKSSYSSSSPPAVFSSTSTIQYHHLKTYAVHPHPPLAIALLPQSESESKSNPTTHFKRRDALGLALSFGLLHPFFQPPQPSSAATDTTAPCEFTVAPSGLAFCDKLVGTGPQALKGQLIKAHYVGRLESGKIFDSSYNRGKPLTFRVGVGEVIKGWDEGILGGDGVPPMLAGGKRTLKLPPELGYGSRGAGCRGGSCIIPPDSVLLFDVEFISKA* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1878 233 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 134 233 IPR001179 GO:0003755
Dod04g1878 233 Gene3D - 105 233 IPR046357 GO:0003755
Dod04g1878 233 PANTHER - 9 232 IPR044609 GO:0000413|GO:0003755|GO:0061077
Dod04g1878 233 SUPERFAMILY FKBP-like 110 231 - -
Dod04g1878 233 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 130 230 IPR001179 GO:0003755
Dod04g1878 233 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP13, CHLOROPLASTIC 9 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1878 Dod-Chr4 41745810 41748998 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1878 134 231 Calmodulin-binding Proteins AT5G48570 42.857 9.69e-16 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1878 K01802 - vvi:100262788 258.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1878 04 41745810 41748998 Dod04g1878 04 41745810 41748998 ECH