Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1873 ATGTCTCAGACTCAAGGTGACCGAACAGATAACACTTCTCTTAGGCAAGAGAATGAGAGGATGGTAGCAGAAAACTTCGTAATCAGAGAGGCATTGAAGAATATACTTTGCTTATCTTGTGGAGGTCCAACCTTAGCAGACAAACACAGCGAAATTCGTTTGCAAAAACTAAAGGAGGAAAATACATATCTAAAACTAGAGGCTAGTAGTCTAACTATATACATATTGATTGATTCTCCTTTGATAGATTATCAGAGAATGTCACAGCTTCTTGAAAGTTACAACGTGATAAGTAGTTCAATGTTACAGCAACATGTGCCGCTGTCTCCTCCAACAGAATCATCGTTTTCAAGAGCAAGTTTGCTGAACACGCAGATTGAAATCCCTTCTCTGTGTCAACGCGTTCATAATCTTTGTCAACAACACATGACAAGTACTCCTACTGCTCTTGAAGAACGTGAACTTCCTACTCTTACTCTTGCTCATCACACTCATGCTCTTGGTGGCCACCACCGCCTACATAATAACAATATTTCTGCCCTTGATCAACAAATCTTTCCTCTGCTTAATCATCAAGATGTTCCTGCTCTTGCTCCGGCGGCCATTGATCATGATACGGGTCCTTCTCAACCTGCACCAATGGATCAAGATCACAATCACAATCACAACCGCAACGTTCCTTCTGTTGTTCATGATTTTGCTTCACTTATTGGAAATTCGAATGATGAAATGTTGCCTATGCCCGCGACTGCGTTTAAAGATGGTGAGAGAGGGAAGATGAAAGATGCTGCAAATGATGCTATGGAAGAGTTAACAAGGCTTCTGCGGATGAATGAGCCTTTCTGGTTCAGGTCTACGGTCGATGGCAAGTTCATCCTTCAACGTGAAAGCTACGAGAAGATATTTTACAAAGTTAATCGCTTAAAGGGTCCACGCGTGCGCAGAGAGTCATCTAAAGATTCACGATTGGTGGTCGGGAATGGACCGGAAATAGTTGACATGTTCTTAGATTCGGAAAAATGGGCTGCGCTTTTCCCAACAATTGTTAAAAGAGCATACACAATCGAAGTAATTGACAACGGTTTGCCGGAGGGCCGAAGTGGAGCCTTGCAGTTGATGTATGCAGAAATGCACATTCTTTCACCTTTGGTTCCTTCTCGCGAGTTCTACTTCCTCCGCTATTGTATGCAAGTTGATGCAGGTGTATGGGTGATAGCCGATGTGTCGTTTAATTCCTCAAAGTTCAGCACCACCTCTACTTCAGCTTGGAGGTTTCCATCTGGATGCTCAATTCACGACATGAATGATGGGTCCTGCAGGGTTACTTGGGTGGAACATGTGGAAGTGGATGACAAGATCCAAACTCACCGGATTTTCAGAGACCTTATTTGCGACGGTAATGCATTTGGAGCAGAAAGATGGGTTTTGACACTCGAAAGAATGTGTGAGAGATTTGCATTCGCCTCAATGGAACAAATACCTAGTTGTGATGCTGGAGGAGTGATCACTATACCTGAAGGAAGGAGGAATGTGATGCAACTTGCTTCGCGCATGGTAAAGCTGTTTTGTGGAGCATTGGAGATGCCAGATCACATGGAATTCCCATATGTAAGGGTGAACAATTGCGGGGTAAGAGTGTCTGTTCGAAATAGTTTGGCGCCAGGCGTGCCAAAGGGCATGGTTGTCAGTGCCGCTACCTCCTTTTGGCTTCCTCTCATGCCTCACACCATTTTTGACTTCCTCAAAGACCCAACCACAAGAGATCAGTGGGATGTCCTGTGCCATGGAAATCCAGTGAACCACCTTCAACACATCTCAAATGGATCTCATTCAGACAACTTTACATCAATTATTCGGCCTTTTATCCCGAACGAGAACAACATGCTGCTTCTACAAGAATGCTGCGTAGACCCATTGGGATGCATGGTGGTGTATGCTCCGGTGGATGTTTCAACCATCAATGCGGCAATCAACGGAGAAGACACATCCGCGCTGCCAATTCTTCCCTCCGGCTTCACCGTAGCCGGAGACGGTAGTCGACCAGATCCAGTTGCTGCTTCTGCTGCTAATTCGCAATCATCAGGAGCATTAAGCCGCGGGGGCCATCATGGTACCAGCACCAGACTAGGAGGCTCGCTGCTGACTCTGGTCATTCAGGTGCTCATTTGCAGTCCATCTTCATTGGACCAGCTCAACATGGACTCCGTCGCTGCTGTCAACACTCTCGTCACCTCAACCGTCGAGAACATTAAATTGGCTTTGAATTGTTCCCATTTGGATTGA 2283 0.4542 MSQTQGDRTDNTSLRQENERMVAENFVIREALKNILCLSCGGPTLADKHSEIRLQKLKEENTYLKLEASSLTIYILIDSPLIDYQRMSQLLESYNVISSSMLQQHVPLSPPTESSFSRASLLNTQIEIPSLCQRVHNLCQQHMTSTPTALEERELPTLTLAHHTHALGGHHRLHNNNISALDQQIFPLLNHQDVPALAPAAIDHDTGPSQPAPMDQDHNHNHNRNVPSVVHDFASLIGNSNDEMLPMPATAFKDGERGKMKDAANDAMEELTRLLRMNEPFWFRSTVDGKFILQRESYEKIFYKVNRLKGPRVRRESSKDSRLVVGNGPEIVDMFLDSEKWAALFPTIVKRAYTIEVIDNGLPEGRSGALQLMYAEMHILSPLVPSREFYFLRYCMQVDAGVWVIADVSFNSSKFSTTSTSAWRFPSGCSIHDMNDGSCRVTWVEHVEVDDKIQTHRIFRDLICDGNAFGAERWVLTLERMCERFAFASMEQIPSCDAGGVITIPEGRRNVMQLASRMVKLFCGALEMPDHMEFPYVRVNNCGVRVSVRNSLAPGVPKGMVVSAATSFWLPLMPHTIFDFLKDPTTRDQWDVLCHGNPVNHLQHISNGSHSDNFTSIIRPFIPNENNMLLLQECCVDPLGCMVVYAPVDVSTINAAINGEDTSALPILPSGFTVAGDGSRPDPVAASAANSQSSGALSRGGHHGTSTRLGGSLLTLVIQVLICSPSSLDQLNMDSVAAVNTLVTSTVENIKLALNCSHLD* 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1873 760 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG10-RELATED 3 756 - -
Dod04g1873 760 SUPERFAMILY Bet v1-like 505 677 - -
Dod04g1873 760 Pfam START domain 264 484 IPR002913 GO:0008289
Dod04g1873 760 SUPERFAMILY Bet v1-like 256 485 - -
Dod04g1873 760 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 3 756 IPR042160 -
Dod04g1873 760 MobiDBLite consensus disorder prediction 685 701 - -
Dod04g1873 760 CDD START_ArGLABRA2_like 264 483 - -
Dod04g1873 760 Gene3D - 261 462 IPR023393 -
Dod04g1873 760 MobiDBLite consensus disorder prediction 679 703 - -
Dod04g1873 760 ProSiteProfiles START domain profile. 253 487 IPR002913 GO:0008289
Dod04g1873 760 SMART START_1 262 484 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1873 Dod-Chr4 41584682 41588477 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1873 232 755 Homeobox Transcription Factor Family AT1G73360 43.633 5.56e-134 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1873 K09338 - gmx:100783586 565.844