Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1849 ATGACCTTTCACTGTAAAGGAAACTACTATTTAACCTTTTTGTCCTGTTGTTTTAGACTCTACGTGAGGGGTACAATCCTTGGATACAAAAGATCCAAGTCGAACCAGTACCCCAACACATCTCTGCTACAAGTTGAGGGAGTCAACACCAAGGAAGAGGTAGCATGGTATGCTGGCAAGCGATTGGCATATATCTACAAGGCCAAGGTGAAGAAGAATGGAACCCATTACCGCTGCATTTGGGGTAAGGTTACCAGGCCTCATGGTAACAGTGGTATCGTCCGCGCAAAGTTCAAGTCAAATCTTCCACCAAAATCAATGGGAGCTCGGGTAAGAGTATTTATGTATCCAAGCAACATATGA 363 0.4408 MTFHCKGNYYLTFLSCCFRLYVRGTILGYKRSKSNQYPNTSLLQVEGVNTKEEVAWYAGKRLAYIYKAKVKKNGTHYRCIWGKVTRPHGNSGIVRAKFKSNLPPKSMGARVRVFMYPSNI* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1849 120 Pfam Ribosomal protein L35Ae 20 114 IPR001780 GO:0003735|GO:0005840|GO:0006412
Dod04g1849 120 Gene3D translation elongation factor selb, chain A, domain 4 15 120 IPR038661 -
Dod04g1849 120 PANTHER 60S RIBOSOMAL PROTEIN L35A 18 120 IPR001780 GO:0003735|GO:0005840|GO:0006412
Dod04g1849 120 SUPERFAMILY Translation proteins 20 114 IPR009000 -
Dod04g1849 120 Hamap 50S ribosomal protein L35Ae [rpl35ae]. 22 114 IPR001780 GO:0003735|GO:0005840|GO:0006412
Dod04g1849 120 PANTHER 60S RIBOSOMAL PROTEIN L35A-1 18 120 - -
Dod04g1849 120 ProSitePatterns Ribosomal protein L35Ae signature. 82 103 IPR018266 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1849 Dod-Chr4 41390272 41392261 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1849 19 120 Cytoplasmic Ribosomal Protein Gene Family AT1G07070 90.196 3.27e-67 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1849 K02917 - jre:108991888 212.231