Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1843 ATGATCACCCTCACCGTCTGCCAGCTCGTTGACACCTCCGTCCGAGAGGTTCAGGCGTTGATTTTGTCGCCGACGAGGGAACTGGCGGCGCAGACGGAGAAGGTGATATTGGCGATTGGGGATTTCATGAACATTCAGGCGCACGCGTGCATTGGAGGGAAGAGTGTTGGGGAAGATATAAGGAAGCTTGAGTATGGGGTTCACGTGGTTTCTGGAACCCCTGGGCGGGTTTGTGACATGATCAAGAGGATGACTTTGAGGACCAGGGCTATCAAGCTCTTGGTTCTTGATGAATCTGATGAGATGTTGAGCAGAGGCTTTAAAGATCAGATTTATGATGTGTATAGGTGGATTGGTTAA 360 0.5028 MITLTVCQLVDTSVREVQALILSPTRELAAQTEKVILAIGDFMNIQAHACIGGKSVGEDIRKLEYGVHVVSGTPGRVCDMIKRMTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRWIG* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1843 119 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 119 IPR014001 -
Dod04g1843 119 PANTHER BNAC03G41130D PROTEIN 1 118 - -
Dod04g1843 119 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 1 118 - -
Dod04g1843 119 Pfam DEAD/DEAH box helicase 5 115 IPR011545 GO:0003676|GO:0005524
Dod04g1843 119 Gene3D - 3 118 IPR027417 -
Dod04g1843 119 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 118 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1843 Dod-Chr4 41342759 41346504 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1843 1 118 Eukaryotic Initiation Factors Gene Family AT3G19760 85.593 2.57e-68 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1843 K13025 - gmx:100795032 220.32