Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1831 ATGGTCGATGAACCAATGCCTACTCGCTGGTCTTTCCAGGACTTCAAATTGTATTATGATGCGAAGTTTGGGAGGAAGAAAGTGGTGGAGAATGGTGAGGCTGCTGGTAAAGCGGACAGTAACGGAAGCTCGTTGGGCAATGAATCCAATGGCAATGTGCATGCCAAAAGATCATCGGATTTGGCTATCTACGAGCAGTTTCAAAGCCAGAATCCTGCGCAGACAAATGGTTTTTCACCAAACCATGTGGACGAAAGGCCGCAGAAGTCTTTGCTTCCGCCTTTTGAATCTGCAGAAATGCGTGCTTTGGCTGAGAGCTTAAGTAGGGATATCACTCGTGGGAGTCCAGATGTGAAGTGGGAAAGGATCAAGGGGTTAGAGAATGCCAAAAGATTACTAAAAGAGGCTGTTGTAATGCCAATTAAGTATCCCAAGTACTTTACTGGTCTCTTATCTCCATGGAAAGGCATTCTCCTTTTTGGCCCCCCAGGGACAGGAAAGACAATGCTTGCCAAGGCAGTTGCAACAGAGTGCAAGACTACTTTTTTTAATATTTCAGCATCGTCTGTTGTCAGCAAGTGGCGAG 586 0.4608 MVDEPMPTRWSFQDFKLYYDAKFGRKKVVENGEAAGKADSNGSSLGNESNGNVHAKRSSDLAIYEQFQSQNPAQTNGFSPNHVDERPQKSLLPPFESAEMRALAESLSRDITRGSPDVKWERIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECKTTFFNISASSVVSKWR 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1831 195 MobiDBLite consensus disorder prediction 37 55 - -
Dod04g1831 195 CDD AAA 124 195 - -
Dod04g1831 195 MobiDBLite consensus disorder prediction 34 55 - -
Dod04g1831 195 Gene3D - 116 194 IPR027417 -
Dod04g1831 195 PANTHER AAA DOMAIN-CONTAINING 7 195 - -
Dod04g1831 195 Pfam ATPase family associated with various cellular activities (AAA) 157 194 IPR003959 GO:0005524|GO:0016887
Dod04g1831 195 PANTHER KATANIN P60 ATPASE-CONTAINING SUBUNIT A-LIKE 2 ISOFORM X1 7 195 - -
Dod04g1831 195 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 109 193 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1831 Dod-Chr4 40896317 40899801 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1831 95 194 Calmodulin-binding Proteins AT3G56690 38.614 2.74e-14 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1831 K07767 - gmx:100794098 312.383