Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1801 ATGATGTTATCTCGAAAGATTAGTTTGACTATAGTCATAGTCCTTTCCATTGTAGCCACATCTTCATATGCAGATACAAGGTTGGGGGTTGAAATTGAAGCTTTGAAAGCTTTCAAGAACTCCGTCACCCTTGACCCAAATGGAGCACTTGCAGATTGGGTTGACAGCCACCCTCACTGCAACTGGTCTGGGATTGCATGTGACCCATCTTTAAACCATGTTATCTCAGTTTCTATGGCTGCTCAGCAGCTCCAAGGGAAGATTTCACCCTTCCTTGGAAACATCTCAGGCCTTCAGGTTCTTGACTTAACTTCAAATTCATTTACTGGCTATATTCCTGTTCAGCTTAGTTTTTGCACTCAACTCACTCAGCTGCTTCTTGTAGAAAATTCTCTCTCAGGTCCAATCCCTTCTGAATTAGGAAACCTGAAAAGCCTGCAGTATTTGGACTTAGGTAGTAACAGCTTCAATGGAAGCCTTCCTGAAAGCTTATTCAACATCACTTCTTTGTTGGGTATTGCTTTCAATTTCAACAACCTCACTGGCACAATCCCATCACACATAGGCAAGCTTGTTAACCTTACACAGATTGCAGGATATGGGAATAGCTTTGTTGGGTCTATACCTCCTTCAATAGGTCAGTTGGGAGCTTTGCAATCTCTTGACTTTAGCATGAACAAGCTATCAGGTGCAATACCTCAAGAGATTGGAAACCTCACAAACTTAGAAATCCTTTCCTTGTTCCAAAATTCTTTGACTGGAAAAATCCCTTCAGAACTTGGTCAGTGTACCCAACTTTTGAACCTTGAGTTGTATTACAATCACTTAACTGGAAGTATCCCTCCCGAGTTAGGAAATTTAGTTCAATTGGAAACATTGCGGTTATATGGCAATAACTTGAACTCCACTATTCCATCTTCCATATTCCTGTTGAAATCATTAACACATTTGGGACTCTCACAGAATAACTTAGAGGGAACAATATCTCCTGAGATTGGATCTTTGAGTTCTTTACAAGTTCTAACCCTGCATATAAATAAGTTTACTGGTCAGATCCCTTCATCCATAACAAACTTGACAAACCTGACATATCTATCAATGAGCCAGAATCTCCTTTCAGGTGAAATTCCTTCTAACATTGGTGTGCTTCATAATTTACAGTATCTAATCTTGAACATGAATGACCATCTTCATGGATCCATTCCCCCTAACATTACCAATTGTACTAGGCTGGTAAATGTAAGTTTATCTTTCAATGCATTCACTGGGAGAATTCCTGAAGGATTTTCAAGGTTGCCTAATCTTACTTTCCTGTCTCTTGGGGCCAATAACTTGTCTGGGGAAATCCCAGATGACCTCTTCAACTGCTCCAACCTTCGTACTCTAAGTTTGGGAATAAACAATTTGAGTGGAGTGATAAAATCTGGCATCCAGAACCTGCTTAATGTCCGGACTCTGCAACTGAATGCAAACTCCTTCATAGGACCAATTCCAGCAGAGATTGGAAACTTGAATCAGCTCATCACTTTATCCCTTGCTGAAAATAGGTTATCAGGTTCCATTCCACCAGAACTGTCTAAACTTTCTCTCCTTCAGGGGCTCTCCCTCCACGGCAATGTATTAAAAGGCACAATACCTGATAAACTATCTGAAATCAAACCACTAACCAAACTTTTGCTGCAACAAAACAAGTTGGTTGGTCAGATACCAGATTCTATCTCAAATCTTGAGATGCTTTCATACTTAGACCTCCATGGCAACATGCTTAATGGGTCCATTCCAAGAAGCATGGGGAAGCTTAATCAGCTTTTGATGTTGGATCTCTCTCAAAACCATATCACAGGATCAATTCCTGGAGATGTCATTGCACTCTTCAAAGACATGCAGATGTATCTTAACCTTTCTTACAATCACTTTGTTGGAGGTCTTCCGGATGAGCTGGGTATGTTGGAAATGGTACAAGCCATTGATATTTCAAACAATAATCTTTCAGGTGTCATTCCCATGGCACTTTCTGGGTGCAGAAATCTGTTCAATCTTGATTTTTCAGGAAACAATATCTCAGGTCCTATTCCTGCAGAAGCTTTCAGGCACATGGACTTGCTTCAAAGCTTAAACCTTTCAAGAAATCATTTAGAAGGTCAAATCCCTGAAATCTTGGCAGAGCTTGAGCATCTTAGTTCCCTAGACCTTTCTCAGAATAACTTGAATGGAACTATTCCTCATGGCTTTGCCAATCTTTCCAGCTTGATGCATCTCAACCTCTCTTTCAATCAACTTGAAGGTCCTGTGCCTACAGCTGGAATATTTTCACATATCAATGCATCTGATGTGATGGGAAACCAGGATCTTTGTGGGACGAAATTCCTAAGGCCATGCAGAGAAGGTAATAGTCATTCTCTATCCAAGAGGAGTATAATTATTATTGCTGCACTTGGATCTCTCGCTATACTTCTACTTCTGGTGTTTGTGATTTTGATTCTCAAACGAGGCACCAAACTCTGCAATTCTAAGGAAAATAAGAATAGTGAGAACCATGAACCAGATTATGGTTCAGCATTGGCTCTAAAAAGATTCACTCCAAAGGAGTTAGAGAATGCCACTGGTTTATTCAGCACAGACAACATCATTGGTGCTAGCAGTTTGAGCACAGTTTACAAGGGTCAATTGGAAGGTAGCCAGATTGTTGCCATAAAGAGATTGAATTTGCACCATTTCTCTGCAAATACTGACAAGATCTTCAGAACTGAAGCCAGCACCTTGAGCCAGCTGAGACATAGAAATTTGGTTAAGGTACTTGGCTATGCATGGGAGAGTGGGAAAATGAAAGCTCTAGTTCTAGAGTACATGGAGAATGGGAATTTGGATAGCATCATACATGACAAAAGGGTTGATCAGTCTAGGTGGACATTATCTGCAAGAATCCGTGTATTCATTTCCATTGCTAGTGGATTGGACTATCTACACTCTGGTTATGGCTTTCCCATTGTACACTGTGATTTGAAGCCTTCTAACATCCTTTTGGATAGAGACTGGGAGGCTCATGTCAGTGATTTTGGGACAGCTAGAATACTTGGTCTTCATCTGGAGGATGGTAATACCCTTTCCTCATCAGCAGTTTTGCAAGGCACAGTTGGCTATCTGGCACCAGAAATTGCCTACATAAGGAAAGTAACGACTAAAGTGGATGTGTTCAGCTTTGGGATCCTTTTGACGGAGTTCCTAACAAGAAGAAGGCCCACAGGCCTCTCAGAAGAGGATGGCTTGCCAATCAGTTTGCCTGCAGCAGTGGAAAAAGCCCTTGCAAATGGAAGGGAAGATCTTGCTGATATTGTGGACCCTATGTTAACCATGGATGCCACGAAAGGCCATGTCGATGTATTGATAGAGCTCTTCAAGCTATCCTTGTCTTGTACCCTCCCTAATCCTGAAGATCGACCTAACATGAATGAGGTGTTATCTTCCCTTATTAAGCTCCAGTCAGCAGTATAG 3492 0.4124 MMLSRKISLTIVIVLSIVATSSYADTRLGVEIEALKAFKNSVTLDPNGALADWVDSHPHCNWSGIACDPSLNHVISVSMAAQQLQGKISPFLGNISGLQVLDLTSNSFTGYIPVQLSFCTQLTQLLLVENSLSGPIPSELGNLKSLQYLDLGSNSFNGSLPESLFNITSLLGIAFNFNNLTGTIPSHIGKLVNLTQIAGYGNSFVGSIPPSIGQLGALQSLDFSMNKLSGAIPQEIGNLTNLEILSLFQNSLTGKIPSELGQCTQLLNLELYYNHLTGSIPPELGNLVQLETLRLYGNNLNSTIPSSIFLLKSLTHLGLSQNNLEGTISPEIGSLSSLQVLTLHINKFTGQIPSSITNLTNLTYLSMSQNLLSGEIPSNIGVLHNLQYLILNMNDHLHGSIPPNITNCTRLVNVSLSFNAFTGRIPEGFSRLPNLTFLSLGANNLSGEIPDDLFNCSNLRTLSLGINNLSGVIKSGIQNLLNVRTLQLNANSFIGPIPAEIGNLNQLITLSLAENRLSGSIPPELSKLSLLQGLSLHGNVLKGTIPDKLSEIKPLTKLLLQQNKLVGQIPDSISNLEMLSYLDLHGNMLNGSIPRSMGKLNQLLMLDLSQNHITGSIPGDVIALFKDMQMYLNLSYNHFVGGLPDELGMLEMVQAIDISNNNLSGVIPMALSGCRNLFNLDFSGNNISGPIPAEAFRHMDLLQSLNLSRNHLEGQIPEILAELEHLSSLDLSQNNLNGTIPHGFANLSSLMHLNLSFNQLEGPVPTAGIFSHINASDVMGNQDLCGTKFLRPCREGNSHSLSKRSIIIIAALGSLAILLLLVFVILILKRGTKLCNSKENKNSENHEPDYGSALALKRFTPKELENATGLFSTDNIIGASSLSTVYKGQLEGSQIVAIKRLNLHHFSANTDKIFRTEASTLSQLRHRNLVKVLGYAWESGKMKALVLEYMENGNLDSIIHDKRVDQSRWTLSARIRVFISIASGLDYLHSGYGFPIVHCDLKPSNILLDRDWEAHVSDFGTARILGLHLEDGNTLSSSAVLQGTVGYLAPEIAYIRKVTTKVDVFSFGILLTEFLTRRRPTGLSEEDGLPISLPAAVEKALANGREDLADIVDPMLTMDATKGHVDVLIELFKLSLSCTLPNPEDRPNMNEVLSSLIKLQSAV* 1164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1801 1163 ProSiteProfiles Protein kinase domain profile. 871 1163 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g1801 1163 Gene3D Ribonuclease Inhibitor 178 249 IPR032675 -
Dod04g1801 1163 PRINTS Leucine-rich repeat signature 747 760 - -
Dod04g1801 1163 PRINTS Leucine-rich repeat signature 726 739 - -
Dod04g1801 1163 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 2 116 - -
Dod04g1801 1163 Gene3D Phosphorylase Kinase; domain 1 832 949 - -
Dod04g1801 1163 Gene3D Ribonuclease Inhibitor 384 550 IPR032675 -
Dod04g1801 1163 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 164 297 - -
Dod04g1801 1163 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 120 170 - -
Dod04g1801 1163 SMART LRR_sd22_2 359 382 - -
Dod04g1801 1163 SMART LRR_sd22_2 600 621 - -
Dod04g1801 1163 SMART LRR_sd22_2 143 169 - -
Dod04g1801 1163 SMART LRR_sd22_2 723 749 - -
Dod04g1801 1163 SMART LRR_sd22_2 239 271 - -
Dod04g1801 1163 SMART LRR_sd22_2 552 578 - -
Dod04g1801 1163 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 164 297 - -
Dod04g1801 1163 Gene3D Ribonuclease Inhibitor 250 311 IPR032675 -
Dod04g1801 1163 Gene3D Ribonuclease Inhibitor 551 629 IPR032675 -
Dod04g1801 1163 Gene3D Ribonuclease Inhibitor 312 383 IPR032675 -
Dod04g1801 1163 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 365 1159 - -
Dod04g1801 1163 Gene3D Ribonuclease Inhibitor 630 801 IPR032675 -
Dod04g1801 1163 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 2 116 - -
Dod04g1801 1163 Pfam Protein kinase domain 872 1089 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g1801 1163 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 120 170 - -
Dod04g1801 1163 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 292 372 - -
Dod04g1801 1163 Gene3D Transferase(Phosphotransferase) domain 1 950 1163 - -
Dod04g1801 1163 SMART serkin_6 871 1163 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g1801 1163 Pfam Leucine rich repeat N-terminal domain 31 68 IPR013210 -
Dod04g1801 1163 Pfam Leucine rich repeat 555 613 IPR001611 GO:0005515
Dod04g1801 1163 Pfam Leucine rich repeat 654 712 IPR001611 GO:0005515
Dod04g1801 1163 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 365 1159 - -
Dod04g1801 1163 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 292 372 - -
Dod04g1801 1163 SMART LRR_typ_2 215 238 IPR003591 -
Dod04g1801 1163 SMART LRR_typ_2 504 528 IPR003591 -
Dod04g1801 1163 SMART LRR_typ_2 432 456 IPR003591 -
Dod04g1801 1163 SMART LRR_typ_2 747 772 IPR003591 -
Dod04g1801 1163 SMART LRR_typ_2 143 167 IPR003591 -
Dod04g1801 1163 SMART LRR_typ_2 699 722 IPR003591 -
Dod04g1801 1163 SMART LRR_typ_2 359 383 IPR003591 -
Dod04g1801 1163 SMART LRR_typ_2 239 263 IPR003591 -
Dod04g1801 1163 SMART LRR_typ_2 335 358 IPR003591 -
Dod04g1801 1163 SMART LRR_typ_2 287 311 IPR003591 -
Dod04g1801 1163 SMART LRR_typ_2 723 746 IPR003591 -
Dod04g1801 1163 SMART LRR_typ_2 650 673 IPR003591 -
Dod04g1801 1163 SMART LRR_typ_2 576 600 IPR003591 -
Dod04g1801 1163 SUPERFAMILY L domain-like 58 257 - -
Dod04g1801 1163 SUPERFAMILY RNI-like 202 575 - -
Dod04g1801 1163 ProSitePatterns Serine/Threonine protein kinases active-site signature. 996 1008 IPR008271 GO:0004672|GO:0006468
Dod04g1801 1163 SUPERFAMILY Protein kinase-like (PK-like) 847 1157 IPR011009 -
Dod04g1801 1163 SUPERFAMILY L domain-like 477 807 - -
Dod04g1801 1163 Gene3D Ribonuclease Inhibitor 29 177 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1801 Dod-Chr4 40597640 40601541 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1801 31 1160 Receptor kinase-like Gene Family AT5G46330 54.873 0.0 1144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Dod04g1801 Pkinase 4.3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1801 K13420 - gmx:100817960 1737.62