Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1798 ATGGCAGCCTCCACCATGGCTCTCTCCTCCCCATCACTGGCCGGAAAGGCAGTGAAGCTCTCCCCATCAGCCCCAGAGCTCGGTGTTGGGAGAGTCTCCATGAGGAAAACCGTGACCAAGCAGGTCTCATCCGGAAGCCCATGGTACGGCCCAGACCGTGTCAAGTACTTGGGCCCATTCTCTGGTGAGCCCCCGTCCTACCTCACTGGTGAGTTCCCAGGTGACTATGGCTGGGACACTGCTGGGCTTTCCGCCGACCCGGAGACCTTCGCAAGGAACCGCGAGCTTGAAGTGATCCACTCTAGGTGGGCCATGCTTGGGGCCTTGGGCTGCGTCTTCCCAGAGCTTTTGTCCCGCAACGGTGTTAAATTCGGTGAGGCCGTTTGGTTCAAGGCCGGGTCACAGATCTTTAGCGAGGGCGGGCTTGACTACTTGGGCAACCCAAGCCTGATCCATGCACAGAGCATCTTGGCTATCTGGGCCTCCCAGGTCATCTTGATGGGTGCCGTTGAGGGTTACCGTATTGCTGGTGGGCCTCTTGGTGAGGTCACTGACCCACTTTACCCAGGTGGCAGCTTTGACCCACTGGGCCTTGCAGATGACCCGGAGGCTTTTGCTGAGCTCAAGGTGAAGGAGATCAAGAACGGTAGGTTGGCTATGTTCTCTATGTTTGGGTTCTTTGTTCAGGCTATTGTTACTGGAAAGGGCCCATTGGAGAACCTCGCTGACCACCTCGCTGACCCAGTCAACAACAACGCTTGGGCCTATGCCACCAACTTCGTCCCCGGAAAGTGA 795 0.5748 MAASTMALSSPSLAGKAVKLSPSAPELGVGRVSMRKTVTKQVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1798 264 Gene3D Chlorophyll a/b binding protein domain 55 257 - -
Dod04g1798 264 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 264 IPR001344 GO:0009765|GO:0016020
Dod04g1798 264 Pfam Chlorophyll A-B binding protein 64 230 IPR022796 -
Dod04g1798 264 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC 1 264 - -
Dod04g1798 264 SUPERFAMILY Chlorophyll a-b binding protein 47 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1798 Dod-Chr4 40589824 40591116 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1798 1 264 Chloroplast and Mitochondria Gene Families AT1G29930 89.888 3.51e-174 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1798 K08912 - qsu:112030611 523.087