Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1790 ATGGAAAAGCAGCCTCTGCTCCCATACATCAGCCCAAAGAAGAAGCCATCAATATTGCCACCGCAGCTTTGTCCATTGCCAGAGGATGATGAAATCGTTGTCCCTATGACCCCTTCGGAGCTCAAGGATCGACTCATCTTTGGCCCTTCCCCAGGAGACCCGTCACCTTTGGTTGAGGCCTTAGCACTTCCCATCAATTCCCCAGCCCCTTCTTCTTCTTCATCTTCTCAGGATTTTGCATCAGCACTCTTAGAATCACGACAACCCCAACAGAACCAACAACAACAAAACTCTTCTTGGCTTGTTGATCCCAATTATCCATGGCGCAAGACCAACCTCCACCGCTCAAAAACTGCACCAGCTATGGCTGTGATCTGTGATTTCAGCAAACAATCCGCCGTGAAGAGACCCCAATTCGGTAGCCAATCGATTGTTCGCCAGGCTTTTATTCTCCTTGTTCTTTATTTGTCATTAGGGGTAGTCATTTATTGGTTCAATCGCCATGATTTTACAGCAAGTGAGACTCATCCTGTAGTGGATGCATTATATTTCTGTATAGTGACAATGTGCACAATAGGCTATGGTGACATTACTCCCAATAGTACCACAACAAAGCTTTTCTCTATATTGTTTGTGTTGGTGGGTTTTGGTTTCATAGACATATTGCTTAGTGGGATGGTTAGTTATGTTCTGGACTTGCAGGAGAATCATTTGTTGAGCGCGGTGAAGGGTAGGGGCGGTGAGAAGGATGGAAGGTCATATATAATTGATGTGAAGAAAGGGAGGATGAGGATTAGGATGAAGGTGGCGTTGGCATTGGGGGTTGTGGTCCTTTGTATTGGACTTGGCGTTGGGGTTATGCATTTTGTGGAAAATCTCAGTTGGTTAGATTCCTTTTATCTTTCGGTTATGTCGGTTACAACTGTTGGCTACGGCGATCATGCATTCAAGACCATGCACGGTCGTATCTTTGCTGCAATTTGGTTGCTTGTGTCGACGCTTGCAGTGGCCCGAGCATTCCTCTATTTGGCTGAGGCGAGAGTAGATAAGCGGCATAGGAGGATGGCAAAATGGATTCTTGGTCAGGATATGACGGTTTCTGAGTTCCTTGCTGCAGATATTGACAACAACGGCTTTGTAAGTAAGTCTGAATATGTTATATACAAGCTCAAGGAGATGGGAAAAGTAACGGAGAAGGACGTCATGCAGATTTGTGAGAAGTTTGACAGACTGGATACTGGGAACTGTGGAAAAATAACACTTGCTGATCTCATGGAGAGTCATCACTGA 1290 0.4527 MEKQPLLPYISPKKKPSILPPQLCPLPEDDEIVVPMTPSELKDRLIFGPSPGDPSPLVEALALPINSPAPSSSSSSQDFASALLESRQPQQNQQQQNSSWLVDPNYPWRKTNLHRSKTAPAMAVICDFSKQSAVKRPQFGSQSIVRQAFILLVLYLSLGVVIYWFNRHDFTASETHPVVDALYFCIVTMCTIGYGDITPNSTTTKLFSILFVLVGFGFIDILLSGMVSYVLDLQENHLLSAVKGRGGEKDGRSYIIDVKKGRMRIRMKVALALGVVVLCIGLGVGVMHFVENLSWLDSFYLSVMSVTTVGYGDHAFKTMHGRIFAAIWLLVSTLAVARAFLYLAEARVDKRHRRMAKWILGQDMTVSEFLAADIDNNGFVSKSEYVIYKLKEMGKVTEKDVMQICEKFDRLDTGNCGKITLADLMESHH* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1790 429 Gene3D - 336 429 - -
Dod04g1790 429 Pfam Ion channel 275 344 IPR013099 -
Dod04g1790 429 Pfam Ion channel 150 230 IPR013099 -
Dod04g1790 429 PRINTS Two pore domain K+ channel signature 187 215 IPR003280 GO:0005267|GO:0016020|GO:0071805
Dod04g1790 429 PRINTS Two pore domain K+ channel signature 307 316 IPR003280 GO:0005267|GO:0016020|GO:0071805
Dod04g1790 429 SUPERFAMILY Voltage-gated potassium channels 145 234 - -
Dod04g1790 429 Gene3D - 142 240 - -
Dod04g1790 429 Gene3D - 274 335 - -
Dod04g1790 429 ProSitePatterns EF-hand calcium-binding domain. 373 385 IPR018247 -
Dod04g1790 429 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 91 424 IPR003280 GO:0005267|GO:0016020|GO:0071805
Dod04g1790 429 PANTHER TWO-PORE POTASSIUM CHANNEL 3 91 424 - -
Dod04g1790 429 MobiDBLite consensus disorder prediction 1 21 - -
Dod04g1790 429 SUPERFAMILY EF-hand 366 426 IPR011992 -
Dod04g1790 429 MobiDBLite consensus disorder prediction 68 103 - -
Dod04g1790 429 SUPERFAMILY Voltage-gated potassium channels 259 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1790 Dod-Chr4 40513210 40519305 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1790 5 426 Ion Channels AT4G18160 63.636 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1790 K05389 - gmx:100804249 663.685