Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1783 ATGCATGATCTTATTAACGACCTTGCTGTGTCTACCATGCAAAATGAAAGGGCTGTGGTGAAGTTCAATTCAACCGATGTCAGAGAAAAGGTGCAGCATTTATCATTCTCAGAGAGCGTTGAAGGAGTTCCTGCTTTTGGTAAAATGTTAAACAAGGTCCAAACCATTGGATTCTGGCATGCTGCTCAAAGTGCAAGTGAAATCACTCAGCCATTTCTTAAATGGATATCTAAGGAATTCAGCTTCTCAGAGATTCAAACCCCTTATTTGTTCTCATTTGGTAAACAAGTTCTGAACTCAGCCAAGAGAGAGTCACCTATCAAATCAAATATGATGAAGGCCCCCTATAACTTGCAGAAAAGAAAGTCTACCTTGATAACTGAAGGCAATGCTGCTGCATTTAAGCAGCCAGAAGACGACCTTACCGTAGAAGAAGAAGAAAATAGTGAGGATGATGATAACAATGATGTTGGTGACGACCCTGATGAAGAAAAAGCAGAAGGAGATGGCGATGCAGTTGATGATCATCAAGAGGATTTAGAATACTTACTAGGAAATGAATGTCCAACAGCTAAAGAGGAGGAACTTCATGAAGGTCTGCTTACAAAAGATGCATGTGAAAACAGTAAGCCTTCCACTAGACATTTCAGCCATGGATGTCATTTGACCGAAGGAAAGATGAACCATGGAATGGAGGACTACATTTTTGCTCAACACAGGAAGCTCAATGGCTATGACTTGGGACTGTATGCTATATTTGATGGTCATTCAGGTCGTGATGTTGCAAAATACTTGCAAATCCATCTCCTTGAAAATATACTGAGACAGCCTGATTTCTCAGAAAATCCAGTGCATGCTGTTAAGAGAGCATGTAAGGCTACAGATGATGAGATCCTAGAAAACGTAGCTGATTCGCGCGGAGGATCAACAGCTGTTGCTGCGATACTAATAGATGGGGTAAATCTACTAGTAGCCAATGTTGGTGACTCTAGAGCAATATCATGCAGAAATGGCATTGCAAAACAGATAACTGCGGATCATGAACCGGAGAAAGAGAGAGATCTTGTTGAGAGCAGAGGAGGTTTTGTGTCCAAGAAACCAGGATGCGTACCAAGAGTGGATGGCCAATTAGCAATGACACGAGCTTTCGGAGATGGAAAACTGAAGGAGCACATTACTGCTGAGCCTGATGTGATGATTCGGGAGATTGGTGAGGACACCGAGTTCATCATTTTGGCAAGTGATGGCCTGTGGAAGGTGATGACAAACCAGGAGGCTTGTGACTGTATCAGAGATGTTGATGATGCTCAGAAAGCAGCTAAAAAGTTAGTCAAAGAAGCCAAATCTCTGGGGAGCTACGATGATATTTCATGCATAGTCGTTACGTTCTAG 1392 0.4231 MHDLINDLAVSTMQNERAVVKFNSTDVREKVQHLSFSESVEGVPAFGKMLNKVQTIGFWHAAQSASEITQPFLKWISKEFSFSEIQTPYLFSFGKQVLNSAKRESPIKSNMMKAPYNLQKRKSTLITEGNAAAFKQPEDDLTVEEEENSEDDDNNDVGDDPDEEKAEGDGDAVDDHQEDLEYLLGNECPTAKEEELHEGLLTKDACENSKPSTRHFSHGCHLTEGKMNHGMEDYIFAQHRKLNGYDLGLYAIFDGHSGRDVAKYLQIHLLENILRQPDFSENPVHAVKRACKATDDEILENVADSRGGSTAVAAILIDGVNLLVANVGDSRAISCRNGIAKQITADHEPEKERDLVESRGGFVSKKPGCVPRVDGQLAMTRAFGDGKLKEHITAEPDVMIREIGEDTEFIILASDGLWKVMTNQEACDCIRDVDDAQKAAKKLVKEAKSLGSYDDISCIVVTF* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1783 463 MobiDBLite consensus disorder prediction 140 173 - -
Dod04g1783 463 SMART PP2C_4 207 461 IPR001932 -
Dod04g1783 463 PANTHER PROTEIN PHOSPHATASE 2C 28-RELATED 181 463 - -
Dod04g1783 463 SUPERFAMILY PP2C-like 214 463 IPR036457 -
Dod04g1783 463 ProSiteProfiles PPM-type phosphatase domain profile. 217 463 IPR001932 -
Dod04g1783 463 Gene3D - 213 463 IPR036457 -
Dod04g1783 463 CDD PP2Cc 225 463 IPR001932 -
Dod04g1783 463 Pfam Protein phosphatase 2C 229 455 IPR001932 -
Dod04g1783 463 MobiDBLite consensus disorder prediction 131 173 - -
Dod04g1783 463 PANTHER ALPHABET, ISOFORM E-RELATED 181 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1783 Dod-Chr4 40454967 40460064 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1783 214 422 PP2C-type Phosphatase Gene Family AT2G34740 68.571 1.94e-99 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1783 - - gmx:100814772 526.939