Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1779 ATGGAGGAAAAACTTCACGTTCCTTTCTGGGTTTTCACTTTCTCATTGCACTGCTTCATGACTTTGTTAGCTCTATGTAGAATTACCGACATCACCACAGACAAGCAAGCACTCGTTGCTCTCAAATCTTCCATCAGTGGAGACCCTCACCATTTCCTCACTCATAATTGGTCTCCCAACTCTTCTGTGTGCAACTGGGTTGGTGTCACTTGTGATGCTCGACATGGAAGGATAAGGACCTTGAAACTTGGTGACATGGGTCTTAGTGGCACCATACCCTCCCATTTGGGGAACCTCTCCTTCCTCACTGTACTCCACCTTGGTGGAAACAGTTTCCACGATCAGTTGCCTGAAGAGCTAGCCCGGCTTCGTAGATTGAAGTCACTCAACTTGAGCTACAATGAGTTCAGTGAAAATGTTCCGGCATGGATAGGAGGCTTATCTTCACTCCGATACTTGAACCTTGAAAACAATAGCCTTGGTGGTTTTATTCCAAAGTCTCTATCCAATCTGACAATGCTAGAGACCTTGCGTTGGGACAACAATCAAATTGAAGGATCCATTCCATCTGAATTTGGCAAAATGACCCACTTGAGGATTTTGTCTATCTTCGCAAACAATCTATCGGGGGTCATTCCTCAAACGATTTCTAACCTCTCTTCACTGGAAAGAATCGATTTATCCTACAACTCTCTATCAGGAGGCATTCCAAGGGAGATTGGTGAACTTCCACAGCTAAAAGCAATTTATCTCCGAAATAATCCGCTTGGTGGCTCCATACCATCAACAATCTTCAATAATTCAATGCTACAAGACGTTGACCTTGAGTCGAGTAATTTAACTGGCAGTCTTCCACCGAACATATGCCGCGGGCTTCCAAATATCCAAGTGCTTTATTTAGGTTTCAACGAGATTTCTGGTGAAATGCCATCTGTTTGGCACCAGTGCAAAGAGTTGACTGATTTAGCATTATCAGAGAATAGTTTCAGCCGAGGAAACATACCACCCGATATTGGAAACTTAACCATGCTTGGCTCCTTATATCTTAATGAAGACAACTTGGAAGGTTCTATACCCAAGGGGATTGGTGATCTTCCTCTACTGACATTATTAGATTTTGGAAGTAACCTTTTAAGTGGATCTATTCCCTCAAATATCTTCAACATGTCATCTCTGAGTTACTTGTCTCTAGCGAATAATTCCCTCTCAGGATCTCTTCCATTACATATCGGCCTAGAAGACTTGGAAGAACTATACTTGTATGATAACAAACTCGGCGGAAAAATTCCCAGTAGCATATCCAATGCTTCTAAGCTTAACACTTTGGAGTTGCCGCGGAATAAATTCAATGGAGTTATACCCAATGCTCTAGGGAATTTGAGACATCTGAAGTGGCTTAATGTAGCAAACAATAATTTAACCACTGATGCTTCCACTATTGAATCAACCTTTCCTACTTCCTTGAATGTTCTTTCGATATCAAGGAATCCACTCCATGCAAAGCTTCCCAAATCCATTGGAAACATGTCCAGTTTGGAAAAGTTCCCTGCAGATTATTGCAGCTTCTATGGTGACATTCCTTTGGAAATTGGAAATTTAAGCAATGTGTTTGGAATAGGTTTGTACGGGAATGATTTAAGTGGACCAATTCCAACCACAATTAATCATTTACAATCTCTTCAATATTTGGCCCTTGGCAGCAATAAACTACAAGGAACCATCATTGTTGAATTTTGTGAAATGAAAAAGCTGAGTGAGTTGTACATAGATGAAAACAAGATGATTATTGGGGAGGTCCCAGCATGCTTTGATAACCTTACTTCTCTCAGAAAGCTTTACCTAAACTCTAACAAACTTAGTAGGGTGCCCTCTTCTATTTGGAGTCTCAAAGACATTCTTGAGGTAAATTTATCTGACAATGCTCTTACCGGATCTCTTCCACTCGAAGTTGGGAACTTAAAAGTTGTTACAATTTTGGATCTATCAAAGAATAAGCTTTCAGGAGGCATTCCTAGTGCCATTGCAGGATTGCAAAATCTGCAAATTCTCAACTTGTCACAAAATCAATTGCTAGGTGATATTCCTAACTCACTTAGTAGTTTGATCAGTTTGACATCATTGGATTTATCCCAAAACTATCTGTCTGGTATGATTCCAAAATCCTTGGAATCACTTTATCATCTCAAATTTATCAATCTTTCTCGAAACAATTTAGAAGGAGAGATTCCTAATGGTGGGCCTTTTAGAAATTTCACTGCTCAATCTTTCATGTTTAACAAAGCACTTTGTGGAAATGCTCGATTACAAGTCCCACCCTGCAGTAAAGTAAAGAAGCAAAAGTCAAATGCAAATATGTTTCTGCTCAAATGCATATTGCCTATAGTGGTGTCAATCATTTTGGTTGTTTTGTGTGTATTCCTTCTAATAAGGCGTCAAAGAAAGAATGATGGTGGCCCTAATGCAGGAAGTTTGTCAACACTACCAACAATAAAAATGATCTCCTATTATGAACTTTCACAAGCAACCAATAGATTTGATGAGAGTAATTTACTTGGCAAGGGCAGTTTTGGTTCTGTGTTCAAAGGTATACTTTCAAATGGGATGGTAATTGCAATCAAATTTTTTAATTTGGACTTGGAATTAGGATCAAAGAGCTTTAGAGCAGAATGTGAAGCTATGCGCAATCTGCGTCATCGAAATCTCATCAAGATCATTGCTTGTTGTTCAAGTCTAGATTATAAGCTTTTAGTAATGGAGTTCATGCCTAATGGAAGCCTTGAGAGATGGTTGTATTCTCATAACCATTGCTTAGACTTCTTGCAAAGGCTTAATATAATGATTGATGTGGCATCTGCATTGGATTACCTCCATCACAGGTCTTTACCAAAAGTGGTTCATTGTGATTTAAAGCCTAGTAATGTCCTGTTGGATGAAGACATGGTTGCCCATGTTAGTGATTTTGGCATTGCCAAACTTCTAGATGAAGGACAATCCAAAGAATATACCGAGACCATGGCTACAATTGGCTATATTGCACCAGAGTTTGGATCTAAAGGGATCATATCCACAAAAGGAGATGTATATAGTTTTGGGATAATGTTGATAGAAACATTCACAAGAAAAAAACCAACAGATGAGATGTTTGCTGCTGGATTAAGCATGAAGGGTTGGATTGTTGAATCATTACCGCATGCAATTACTGAAGTTGTGGATTCCAATTTGTTACAAGACGAAGAGCATCATGTTGATGACATACTAGAATCTACTTCATCTGTCTTGAGATTGGCCATGAATTGTTGTGCGGATTTAGCTGAAGAACGGGGAAATATGACAGATGTTGCTGCGTCATTAATCAAAATCAAGGTCATGTTTTTGAAAACTAGTGAGTGA 3390 0.3926 MEEKLHVPFWVFTFSLHCFMTLLALCRITDITTDKQALVALKSSISGDPHHFLTHNWSPNSSVCNWVGVTCDARHGRIRTLKLGDMGLSGTIPSHLGNLSFLTVLHLGGNSFHDQLPEELARLRRLKSLNLSYNEFSENVPAWIGGLSSLRYLNLENNSLGGFIPKSLSNLTMLETLRWDNNQIEGSIPSEFGKMTHLRILSIFANNLSGVIPQTISNLSSLERIDLSYNSLSGGIPREIGELPQLKAIYLRNNPLGGSIPSTIFNNSMLQDVDLESSNLTGSLPPNICRGLPNIQVLYLGFNEISGEMPSVWHQCKELTDLALSENSFSRGNIPPDIGNLTMLGSLYLNEDNLEGSIPKGIGDLPLLTLLDFGSNLLSGSIPSNIFNMSSLSYLSLANNSLSGSLPLHIGLEDLEELYLYDNKLGGKIPSSISNASKLNTLELPRNKFNGVIPNALGNLRHLKWLNVANNNLTTDASTIESTFPTSLNVLSISRNPLHAKLPKSIGNMSSLEKFPADYCSFYGDIPLEIGNLSNVFGIGLYGNDLSGPIPTTINHLQSLQYLALGSNKLQGTIIVEFCEMKKLSELYIDENKMIIGEVPACFDNLTSLRKLYLNSNKLSRVPSSIWSLKDILEVNLSDNALTGSLPLEVGNLKVVTILDLSKNKLSGGIPSAIAGLQNLQILNLSQNQLLGDIPNSLSSLISLTSLDLSQNYLSGMIPKSLESLYHLKFINLSRNNLEGEIPNGGPFRNFTAQSFMFNKALCGNARLQVPPCSKVKKQKSNANMFLLKCILPIVVSIILVVLCVFLLIRRQRKNDGGPNAGSLSTLPTIKMISYYELSQATNRFDESNLLGKGSFGSVFKGILSNGMVIAIKFFNLDLELGSKSFRAECEAMRNLRHRNLIKIIACCSSLDYKLLVMEFMPNGSLERWLYSHNHCLDFLQRLNIMIDVASALDYLHHRSLPKVVHCDLKPSNVLLDEDMVAHVSDFGIAKLLDEGQSKEYTETMATIGYIAPEFGSKGIISTKGDVYSFGIMLIETFTRKKPTDEMFAAGLSMKGWIVESLPHAITEVVDSNLLQDEEHHVDDILESTSSVLRLAMNCCADLAEERGNMTDVAASLIKIKVMFLKTSE* 1130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1779 1129 SUPERFAMILY L domain-like 519 764 - -
Dod04g1779 1129 Gene3D Transferase(Phosphotransferase) domain 1 921 1126 - -
Dod04g1779 1129 Gene3D Ribonuclease Inhibitor 334 480 IPR032675 -
Dod04g1779 1129 Pfam Protein kinase domain 846 1111 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g1779 1129 SMART LRR_sd22_2 195 221 - -
Dod04g1779 1129 SMART LRR_sd22_2 412 438 - -
Dod04g1779 1129 SMART LRR_sd22_2 701 727 - -
Dod04g1779 1129 SMART LRR_sd22_2 606 631 - -
Dod04g1779 1129 SMART LRR_sd22_2 147 173 - -
Dod04g1779 1129 SMART LRR_sd22_2 653 679 - -
Dod04g1779 1129 Gene3D Ribonuclease Inhibitor 190 333 IPR032675 -
Dod04g1779 1129 SUPERFAMILY Protein kinase-like (PK-like) 823 1118 IPR011009 -
Dod04g1779 1129 SUPERFAMILY L domain-like 292 535 - -
Dod04g1779 1129 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 318 1126 - -
Dod04g1779 1129 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 196 330 - -
Dod04g1779 1129 SUPERFAMILY L domain-like 33 330 - -
Dod04g1779 1129 SMART serkin_6 845 1124 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g1779 1129 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 20 148 - -
Dod04g1779 1129 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 147 235 - -
Dod04g1779 1129 Gene3D Ribonuclease Inhibitor 31 189 IPR032675 -
Dod04g1779 1129 Gene3D Phosphorylase Kinase; domain 1 811 920 - -
Dod04g1779 1129 ProSiteProfiles Protein kinase domain profile. 845 1125 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g1779 1129 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 318 1126 - -
Dod04g1779 1129 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 20 148 - -
Dod04g1779 1129 Gene3D Ribonuclease Inhibitor 481 782 IPR032675 -
Dod04g1779 1129 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Dod04g1779 1129 ProSitePatterns Protein kinases ATP-binding region signature. 851 873 IPR017441 GO:0005524
Dod04g1779 1129 ProSitePatterns Serine/Threonine protein kinases active-site signature. 964 976 IPR008271 GO:0004672|GO:0006468
Dod04g1779 1129 Pfam Leucine rich repeat 197 256 IPR001611 GO:0005515
Dod04g1779 1129 Pfam Leucine rich repeat 142 184 IPR001611 GO:0005515
Dod04g1779 1129 Pfam Leucine rich repeat 415 473 IPR001611 GO:0005515
Dod04g1779 1129 ProSiteProfiles Leucine-rich repeat profile. 679 701 IPR001611 GO:0005515
Dod04g1779 1129 SMART LRR_typ_2 99 123 IPR003591 -
Dod04g1779 1129 SMART LRR_typ_2 195 218 IPR003591 -
Dod04g1779 1129 SMART LRR_typ_2 412 436 IPR003591 -
Dod04g1779 1129 SMART LRR_typ_2 701 724 IPR003591 -
Dod04g1779 1129 SMART LRR_typ_2 677 700 IPR003591 -
Dod04g1779 1129 SMART LRR_typ_2 365 389 IPR003591 -
Dod04g1779 1129 SMART LRR_typ_2 725 749 IPR003591 -
Dod04g1779 1129 SMART LRR_typ_2 460 483 IPR003591 -
Dod04g1779 1129 SMART LRR_typ_2 219 241 IPR003591 -
Dod04g1779 1129 SMART LRR_typ_2 606 629 IPR003591 -
Dod04g1779 1129 SMART LRR_typ_2 292 315 IPR003591 -
Dod04g1779 1129 SMART LRR_typ_2 243 267 IPR003591 -
Dod04g1779 1129 SMART LRR_typ_2 147 171 IPR003591 -
Dod04g1779 1129 ProSiteProfiles Leucine-rich repeat profile. 608 629 IPR001611 GO:0005515
Dod04g1779 1129 Pfam Leucine Rich Repeat 703 725 IPR001611 GO:0005515
Dod04g1779 1129 Pfam Leucine Rich Repeat 679 701 IPR001611 GO:0005515
Dod04g1779 1129 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 196 330 - -
Dod04g1779 1129 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 147 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1779 Dod-Chr4 40421590 40429566 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1779 9 1121 Receptor kinase-like Gene Family AT5G46330 33.646 2.65e-180 558
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Dod04g1779 Pkinase 2.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1779 - K13420 gmx:100784397 1205.66