Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1766 ATGGTGAAAATCTCGTTCGGTGGATACGATGACGGGGAAGGACCTAGCGATCCCACCCAGAAGCGACGCAGGGTAGAACACGAAGACCAACAAGAACAAGAACAAGGGTATGAAATCGGAGACCAACCAAGTGCGATCGAGGAGGAAGTTGTGGTACAACAAGAACGAGACGATGATGGAACTGAAGAGCGTGCTCCAGCAGATCACGAAAGCGTTGATCGAGGAGGGTCTGCAACGGATGATCGGGATAGGTCCATTTCTGTGACCATCACCGACCCTGATGTCCTTGATTGCTGCATTTGCTATGAACCCTTGAGTGCCCCTGTTTTCCAATGTGAGAATGGGCATATTGCTTGCTCTAATTGCTGTGCCAGGCTTGGGAACAAGTGTCCCATGTGCTCAATGCCCATTGGCTATAACCGTTGCAGAGCTATTGAAAAGGTGCTGGAATCTATTAAAATACCATGCCTTAATGCAAAATATGGTTGTAAAGACAAGTTTAATTACAGTATGAAACATGACCATGAGAAGGAGTGCATCTATCAACCATGTTTATGCCCGCATTCAAGTTGCAACTTTGTTGCCTCTTCCAAGGAGTTATCCCTACACTTCAGCTATAGACATATAGGTTCTGGAATACAGTTTATATGCGATAAATTTTTCACAGCCACTTTAAATATTGACCACAAAGCAATTGTTCTTCAAGAGAAAAATGATGCTAATCTATTTGTTGTTCACAATAACCATGAGCATCTGGGGAATTTAGTCCATATAACTTGCATTGGACCCAAATCGAAGACGGGGTTTCATTATGATATCTTGGCTAGGTCTCAGGGAACCTCTCTAATACTGCAATCATTCACCAAGATCAATCAAGGCCACTTTGCTGATACTCCTTCATCAGGGCTTCTTTTGATTCCTTCCGACTTTTTTGGTTCTGGACCACTCAAACTGGATATTCGCATAAGGTCACGACTTCAAACCTTGGCTGCAGAATAA 999 0.4364 MVKISFGGYDDGEGPSDPTQKRRRVEHEDQQEQEQGYEIGDQPSAIEEEVVVQQERDDDGTEERAPADHESVDRGGSATDDRDRSISVTITDPDVLDCCICYEPLSAPVFQCENGHIACSNCCARLGNKCPMCSMPIGYNRCRAIEKVLESIKIPCLNAKYGCKDKFNYSMKHDHEKECIYQPCLCPHSSCNFVASSKELSLHFSYRHIGSGIQFICDKFFTATLNIDHKAIVLQEKNDANLFVVHNNHEHLGNLVHITCIGPKSKTGFHYDILARSQGTSLILQSFTKINQGHFADTPSSGLLLIPSDFFGSGPLKLDIRIRSRLQTLAAE* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1766 332 MobiDBLite consensus disorder prediction 57 86 - -
Dod04g1766 332 ProSiteProfiles Zinc finger RING-type profile. 98 134 IPR001841 -
Dod04g1766 332 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 146 204 IPR013083 -
Dod04g1766 332 ProSiteProfiles Zinc finger SIAH-type profile. 151 209 IPR013010 GO:0008270
Dod04g1766 332 MobiDBLite consensus disorder prediction 15 34 - -
Dod04g1766 332 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4 23 325 - -
Dod04g1766 332 CDD RING-HC_SIAHs 96 134 - -
Dod04g1766 332 SUPERFAMILY TRAF domain-like 151 323 - -
Dod04g1766 332 Pfam Seven in absentia protein family 141 289 IPR018121 GO:0005737|GO:0006511|GO:0007275
Dod04g1766 332 MobiDBLite consensus disorder prediction 1 86 - -
Dod04g1766 332 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4 23 325 IPR044286 -
Dod04g1766 332 SUPERFAMILY RING/U-box 97 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1766 Dod-Chr4 40114677 40119096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1766 94 327 C3H Transcription Factor Family AT2G41980 27.600 5.66e-21 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1766 K04506 - gmx:100778869 433.335