Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1758 ATGTGCAGTATCATCGTTGGGCCAATTATGGAAAATAAGGACAGGTATCAAGGTGATTTAAGTGACATAATCCGTGCTAGTTATTATGGCAGCTGCAGCACAGGCACTGCTTCTTCATCTGAAGTAGCTGCTCCCTTCACTCATGATCATCACTGGATGTTCCTTTCTGATCCCATGGATTTCTCTTCTGTTTTGGAGGAAGAGGACCCCAGGGGCAACTTTGGTGATCCATTCTCAAACACCAGAGATCCCTTTCTACATGAGCTATGTATGCCTGTTTCTGCCAGCTACTTGAACAGCTCATCTGGCTCTGCTGAAATTTGCGGTTCTGTGAATATGGAAGAGGCTGCTTGTTTTGGTGGTGGCGCTGGTGTTGCAAGTAGCGATGCTTGTGTTTTAGCACAAGAGAACATTGTTGTGGATGATGTCATGAGAAGGCCTTGTAACATCATATTGTCAAACATGATTCAGATCTCTCCCAAAGCCGAGTTGCCCATCTCAACATGTGATTCGCCTGTGACGGCTAAAGCTTCGCCAAAGATAGCGAAGCCTTCTGCTGTGGTTTCTGGCAACATGATTAATGCAAACACCTCTAAGGATCATTGCTTTGTGGACAACACAGGAGTGCAGATCTCATCTCCTAGGAATCCAGCAGCAGGTCCTAAGCGAAGGAAAAGCCAGGCCAAGAAGTCGATTTGTATTCCTGCGCCAGCAGCTCCAAACAGCAGACAAAGTGGAGAGGTAGTTCCTTCTGATCTGTGGGCTTGGAGAAAATACGGTCAGAAACCCATTAAAGGTTCTCCATTTCCAAGGGGTTATTATAGATGCAGCAGCTCAAAGGGTTGCCCTGCAAGGAAACAAGTTGAGAGGAGCAGAACAGACCCAAACATGTTGGTCATTACATACACTTCGGAGCACAGCCATCCTTGGCCAACTCAAAGAAACTCTCTGGCTGGTTCATCCCGGTCCCAACCCTCCAAGAACATCATCAATGCTGCTTCAAAGAACTCAGAAACAAGTACTCAAACCACTGAGTCCCATAAGGGCACAACAACAACAACAAAACCACAAGAAGAGGAACAAGAGAGCAACAGTGACGGCATTGTGTCCCCATCAGTTGTTGCTGAGAACTCAGCAAACAATGCATCTGTGAAGGAAGAGATCGATGGCGTGGAGAAACAGCTTGAGATGGATGATAATATTGGAGAATTCAGCAATGGAGTAGTAGTCCCGTACAAGAATAAACAACTTGAGGAGTACTTCTTTTCAGAATTGGGAGAAATGGAAGCAGATGATGATGATGATTCACTGAACCTATTCTCTGCTCAAGGTTTCATTAATGCAGTTGATCATGATCATCAGCAGAGAGAATCCAAGGGCTTAGATCCATTTCATGTCCTTGACTGGTCCGGGGATAACAGCACCAGATACCACCTCATTTGA 1443 0.456 MCSIIVGPIMENKDRYQGDLSDIIRASYYGSCSTGTASSSEVAAPFTHDHHWMFLSDPMDFSSVLEEEDPRGNFGDPFSNTRDPFLHELCMPVSASYLNSSSGSAEICGSVNMEEAACFGGGAGVASSDACVLAQENIVVDDVMRRPCNIILSNMIQISPKAELPISTCDSPVTAKASPKIAKPSAVVSGNMINANTSKDHCFVDNTGVQISSPRNPAAGPKRRKSQAKKSICIPAPAAPNSRQSGEVVPSDLWAWRKYGQKPIKGSPFPRGYYRCSSSKGCPARKQVERSRTDPNMLVITYTSEHSHPWPTQRNSLAGSSRSQPSKNIINAASKNSETSTQTTESHKGTTTTTKPQEEEQESNSDGIVSPSVVAENSANNASVKEEIDGVEKQLEMDDNIGEFSNGVVVPYKNKQLEEYFFSELGEMEADDDDDSLNLFSAQGFINAVDHDHQQRESKGLDPFHVLDWSGDNSTRYHLI* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1758 480 SUPERFAMILY WRKY DNA-binding domain 248 311 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod04g1758 480 Pfam WRKY DNA -binding domain 252 309 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod04g1758 480 MobiDBLite consensus disorder prediction 294 351 - -
Dod04g1758 480 ProSiteProfiles WRKY domain profile. 245 311 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod04g1758 480 MobiDBLite consensus disorder prediction 209 230 - -
Dod04g1758 480 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 17 472 IPR044810 GO:0003700
Dod04g1758 480 MobiDBLite consensus disorder prediction 363 384 - -
Dod04g1758 480 Gene3D WRKY domain 224 304 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod04g1758 480 MobiDBLite consensus disorder prediction 275 385 - -
Dod04g1758 480 Coils Coil 374 394 - -
Dod04g1758 480 PANTHER WRKY TRANSCRIPTION FACTOR 14-RELATED 17 472 - -
Dod04g1758 480 SMART WRKY_cls 250 310 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1758 Dod-Chr4 40027776 40031018 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1758 1 431 WRKY Transcription Factor Family AT2G34830 40.133 2.59e-77 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod04g1758 WRKY 2.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1758 - - gmx:102669548 495.352