Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1754 ATGGAGTCCAAGTGGAAGATGACCAAGGCGAAGACGGCAAAGAAGAAGAACCACGAGCAGACCCCCAAGCCGAAGCTCGAGCGCCTCAACGCCAAGAAGAACATCGATTACCAGCTTCCAACCGCTTTCCAACAACACCCTCATTCACCTCCTTCCTCTTCCTTCCACCGCCAAACCAGCTTTAGGGTCTCCGACGGCGAATTCGATCTCATCTTCCAAAGATTGGGCCTCTCCGGCCCAGAAGAATTCGCTATCCCCACCGAAGATTGGGAAGCACGAAAGGCTCGCTTTGCTACCAAAAAAGTGAAGGAAGATCGCAATTCAGCTGAATTGGGAACTGGGGTTCTGCTTGATTCCGATGCTGAGTCCAAAGATGAGAACTTTTTGCGACCCTTTGAAGAGGGAGCCTTGAAGCTCGGTGTTTCTTATTCCAAGGTTTTGGGTGGGAGAAATGGAGATGGGGTTGTTGGGGGAGGGATCAAGGGTGTTAGGCCTCCAGTTCTGGCTCCACCACCTCCCATGTCGAGGCCAATTGTTGATGGGTTTGGTTCCAATTGGGATTTGATGAGGTCTTTTGGTCCGCAGGATAATGTTCTTGGTGTTGGTGTTGTTGATTCGCCGTCTTCTTCGGGTGAAATTGGTGGTGCTTGTGGCAGGGTCAGGAATGGGGAAAGGAGCTTGCTTTTCACGGATTCTGGTTCGTTCACTACCTCCCATGATGATGATAGTGATGTCGGTGGAGAAAGGGTTTGTTCATGTTCTGGTTCTGGTGTGGTTGATGAGTTGTCTGACAGTGTTTCCTCAAATGGGTGGTTCTCATCGTGGCAAAAGGGTGACCTTTTGGGAAAGGGGTCCTTTGGAACCGTCTATGAAGGCTATACGGCTGATGGATTCTTTTTTGCGGTGAAGGAGGTGTCTTTGTTGGATGAAGGTATCCAGGGGAAACAGAGCATCTTCCAGCTTCAGCAGGAAATATATTTTTTGAGTCAGTTTAAACATGAGAACATAGTTCGATATTTTGGCACAGATAAGTCCCAGGACGGAAGTGCACTTTATATCTTCCTTGAACTTGTGTCAAAAGGGTCATTGTCAAATCTCTATCAAAAGTATCGCTTAAATGATTCTCAAGTTTCTGCATACACAAGGCAGATTTTAAGTGGCTTGAAGTTTCTTCATGACCGAGATGTTGTCCACAGGGATATCAAGTGTGCTAATATACTGGTTGATGTAAGTGGGTCAGTCAAGCTTGCAGATTTTGGGTTGGCAAAGGCAACTAAACTGAATGATGTTAAATCGAGCAAAGGCTCCCCATACTGGATGGCCCCAGAGGTTTGTCCTTGTCTTGTGTCATTTGTTCGGAATAATTCCTTCAAAGAGATTAACTAG 1386 0.4697 MESKWKMTKAKTAKKKNHEQTPKPKLERLNAKKNIDYQLPTAFQQHPHSPPSSSFHRQTSFRVSDGEFDLIFQRLGLSGPEEFAIPTEDWEARKARFATKKVKEDRNSAELGTGVLLDSDAESKDENFLRPFEEGALKLGVSYSKVLGGRNGDGVVGGGIKGVRPPVLAPPPPMSRPIVDGFGSNWDLMRSFGPQDNVLGVGVVDSPSSSGEIGGACGRVRNGERSLLFTDSGSFTTSHDDDSDVGGERVCSCSGSGVVDELSDSVSSNGWFSSWQKGDLLGKGSFGTVYEGYTADGFFFAVKEVSLLDEGIQGKQSIFQLQQEIYFLSQFKHENIVRYFGTDKSQDGSALYIFLELVSKGSLSNLYQKYRLNDSQVSAYTRQILSGLKFLHDRDVVHRDIKCANILVDVSGSVKLADFGLAKATKLNDVKSSKGSPYWMAPEVCPCLVSFVRNNSFKEIN* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1754 461 SUPERFAMILY Protein kinase-like (PK-like) 273 445 IPR011009 -
Dod04g1754 461 ProSitePatterns Serine/Threonine protein kinases active-site signature. 396 408 IPR008271 GO:0004672|GO:0006468
Dod04g1754 461 Pfam Protein kinase domain 276 444 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g1754 461 MobiDBLite consensus disorder prediction 1 30 - -
Dod04g1754 461 ProSitePatterns Protein kinases ATP-binding region signature. 281 303 IPR017441 GO:0005524
Dod04g1754 461 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 18 109 - -
Dod04g1754 461 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 155 445 - -
Dod04g1754 461 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 18 109 - -
Dod04g1754 461 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 155 445 - -
Dod04g1754 461 Gene3D Transferase(Phosphotransferase) domain 1 273 451 - -
Dod04g1754 461 SMART serkin_6 275 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g1754 461 ProSiteProfiles Protein kinase domain profile. 275 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1754 Dod-Chr4 39972975 39978375 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1754 6 444 MAP Kinase Kinase Kinase AT4G08500 40.000 6.15e-100 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Dod04g1754 Pkinase 5.9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1754 K13414 - aip:107631583 551.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1754 04 39972975 39978375 Dod03g0113 03 1246804 1251383 PCT