Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1753 ATGTCTTTGATGGGTAGAGGGAAAGAACCGCAAAAGATGGAGATTGATCTCTCTTTGAAGATAGATGTTGATGATGAAAATAGAGGAGAAGCAACAGTAGATGAGCGAGTGAAAGAAGATGAAGGGGAAGAAATGACAGGGACACAGGAAAAGGAAGAAGTTCCTGAAGCCACAGCTGGCGAAATAGAAGATGATGCATCAGTGGTTGAAATTTCTTTGCAAGATAACACAAAAGCAAGAGAGTTAAGTATCTTACAAATGGAGATGGAAAGTATGAAAGAGGAAAACAAAGCTCTTAGGAAAGTGGTGGAGCAAACCATGAAAGATTATTATGATCTGCAAATGAAATTTTCAATCATCCAGGACAACAATAAAAACAAGGAGCATCAAATTTCTCTCTCACTTCAAGACAATGCAAGCAATGAAGGGCCATCGAGAATTCATGAGATCTTTAATAACAAAATTCAAAGAGCACCATCGCCACAAAACACCGACGATGATAGTTTAAGCGATAGTGAATTGGGTTTATCACTAAGGTTGCAGAAAAGCACCAGCCATAAAGAAACGGAGGAAGATAAGGAAGACAAAAAGGAGCAGCCAACAGGTTTCGCATCATCAGTGCAGAACAAATTGCAGCGGACACATGAATTGTCTGGTATTACTAGCCACGTTGCCTCACCACCAAATAGGAAGGCTAGGGTTTCTGTTAGAGCAAGATGTGAGGCAGCCACGATGAATGATGGATGCCAGTGGAGAAAATATGGACAGAAAATTGCAAAAGGAAATCCATGTCCACGAGCCTACTATCGTTGCACTGTTGCTCCGGGATGTCCCGTTAGGAAACAGGTGCAAAGATGCATAGATGACATGTCCATACTAATCACAACCTACGAAGGGACACATAACCATCCACTTCCTGTGGGGGCAACTGCCATGGCTTCTACAGCTTCTGCAGCAGCGTCCTTCATGTTGCTGGACTCAAGCAATCCTCTCGCTGATGGCACATCAAGTTTCAGTCATGCAGCTCTACCTTACAATACCTTCCACCCATTAAACCCAGCTTCCAATATTAGAAGCATAAACCCTAGTGACCCCTCCAAAGGGATTGTTCTTGATCTCACCAACAATCTCAATGACCAATCACGACGTTTTCCTAGTGGTATCTCCTCCAGTGCGACAACTGAACCGCGTTTTTCTTGGATGCCAAACAAGTACCAGGGTGGTGGTACCGCCATTGCAATGAACAGCTTTCACCATAATCCTACTAGAGCAGTGGATAATCATGGGAGGATTTGGAATAAGGGAGAACAAAGTAATAAGGCAGTAGACGAGGATGTGTCGGCAATTGCCTCTGATCCTAAGTTTAGGGTTGCTGTGGCAGCGGCCATAACATCACTCATGAATAAAGATCAGAGCCACGCTACTCATTGTCCTATAGGGACTTCCTTTGGTCCCAGGAGTAGCAGTGGCCAAAATGGTGGCTCTAGTGGTAGCAACAAATGGGCCATAGACTCTCTCTCTACAAATGGAAATGGCAAGACCACTTGA 1548 0.4393 MSLMGRGKEPQKMEIDLSLKIDVDDENRGEATVDERVKEDEGEEMTGTQEKEEVPEATAGEIEDDASVVEISLQDNTKARELSILQMEMESMKEENKALRKVVEQTMKDYYDLQMKFSIIQDNNKNKEHQISLSLQDNASNEGPSRIHEIFNNKIQRAPSPQNTDDDSLSDSELGLSLRLQKSTSHKETEEDKEDKKEQPTGFASSVQNKLQRTHELSGITSHVASPPNRKARVSVRARCEAATMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCIDDMSILITTYEGTHNHPLPVGATAMASTASAAASFMLLDSSNPLADGTSSFSHAALPYNTFHPLNPASNIRSINPSDPSKGIVLDLTNNLNDQSRRFPSGISSSATTEPRFSWMPNKYQGGGTAIAMNSFHHNPTRAVDNHGRIWNKGEQSNKAVDEDVSAIASDPKFRVAVAAAITSLMNKDQSHATHCPIGTSFGPRSSSGQNGGSSGSNKWAIDSLSTNGNGKTT* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1753 515 SUPERFAMILY WRKY DNA-binding domain 238 306 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod04g1753 515 ProSiteProfiles WRKY domain profile. 240 306 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod04g1753 515 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 14 507 IPR044810 GO:0003700
Dod04g1753 515 MobiDBLite consensus disorder prediction 183 200 - -
Dod04g1753 515 Pfam WRKY DNA -binding domain 246 304 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod04g1753 515 MobiDBLite consensus disorder prediction 24 63 - -
Dod04g1753 515 MobiDBLite consensus disorder prediction 471 515 - -
Dod04g1753 515 Gene3D WRKY domain 230 307 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod04g1753 515 MobiDBLite consensus disorder prediction 24 56 - -
Dod04g1753 515 Coils Coil 82 109 - -
Dod04g1753 515 PANTHER WRKY TRANSCRIPTION FACTOR 9-RELATED 14 507 - -
Dod04g1753 515 SMART WRKY_cls 245 305 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod04g1753 515 MobiDBLite consensus disorder prediction 180 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1753 Dod-Chr4 39947812 39950369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1753 38 368 WRKY Transcription Factor Family AT1G68150 47.761 4.39e-84 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod04g1753 WRKY 1.8e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1753 - - gmx:100820209 692.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1753 04 39947812 39950369 Dod04g1753 04 39947812 39950369 ECH