Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1734 ATGAAGGGCATAAGCAATGCACTCCACGGATTGAAACCTGTATTGCTAATGGTGATGGCGCAGTTTGCATTTGCTGCAGTCAATGTGCTCTACAAGCTCGCCATAAATGATGGAGTCAACATGAGGGTAGCTACTGCTTACCGCCTCTGTTTCGCGTCAGCCTCCACTATCCCTCTTGGTCTCATTTTTGATAGGAAGAAGACACCAAAGATAACACTGAAGGTGCTTTTATTGGCATTTCTTTGTGGGTTATTTGGTGGAAGTTTGTATCAGAACCTTGTATTCGAGGGCTTGGCTTTGATGCCAGCAACATTTATGTTGGCTATGTTCAACCTTGTTCCAGGCATCACCTTCATCGTGGCCATATCTTGCGGTTTGGAAAAATTAAATTTGGGAGCAGCATCGGGGAAGGCCAAGGTGTTGGGAACTGCAATTGGAATTGGTGGGGCAATGCTATTAAACTTTTACCAAGGGGTAGAAATTAATATTTGGTCTTCTCGCATCAATCTTTTGCATCCTCATCAGAACCAAAATGGGCATACGATGACACCACTGCATGCTGGTTCAGGTAGTAATGTATTGGGTGCTGCATGTGCCATAGGAGGCTACAGTTCTTTCTCTTTGTGGCTCATCATTCAGGCTAAGATGAGTGAAGAATACCCATGCCATTACTTGGGCACAGCTTTGATGTCTACAATGGGCGCAATACAAGCCATTATTTTTGCTCTCTGTGTTGATAGAGATTGGAGGCAATGGAAGCTGGGTTGGAATGTGAGGCTTCTTGCTGTGGCGTATTCGGGAATTGTGCCCTCTGGATTAATGATTGTGGTCATCGGATGGTGCATACAGAAGAGAGGCCCTCTATTTGCCTCTATTTTCAGTCCTCTACAACTTGTCATTGTGGCTATTGCTGCCTTTTTGACGTTGGGTGAGAACTTATACTTAGGAAGTGTGCTTGGATCAATTGTGATTGTGTTTGGCCTATACATTGTGCTTTGGGGAAAGAGCGAAGAACTAAAAAAGAAGACTCAGCTAGCATCGTTAGAAATCTCCAGAGAATCTGAAGCTGTTAATGCTGTATAG 1083 0.4414 MKGISNALHGLKPVLLMVMAQFAFAAVNVLYKLAINDGVNMRVATAYRLCFASASTIPLGLIFDRKKTPKITLKVLLLAFLCGLFGGSLYQNLVFEGLALMPATFMLAMFNLVPGITFIVAISCGLEKLNLGAASGKAKVLGTAIGIGGAMLLNFYQGVEINIWSSRINLLHPHQNQNGHTMTPLHAGSGSNVLGAACAIGGYSSFSLWLIIQAKMSEEYPCHYLGTALMSTMGAIQAIIFALCVDRDWRQWKLGWNVRLLAVAYSGIVPSGLMIVVIGWCIQKRGPLFASIFSPLQLVIVAIAAFLTLGENLYLGSVLGSIVIVFGLYIVLWGKSEELKKKTQLASLEISRESEAVNAV* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1734 360 Pfam EamA-like transporter family 195 332 IPR000620 GO:0016020|GO:0016021
Dod04g1734 360 Pfam EamA-like transporter family 12 154 IPR000620 GO:0016020|GO:0016021
Dod04g1734 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
Dod04g1734 360 PANTHER WAT1-RELATED PROTEIN 9 356 IPR030184 GO:0016021|GO:0022857
Dod04g1734 360 PANTHER MTN21/EAMA-LIKE TRANSPORTER FAMILY PROTEIN, PUTATIVE-RELATED 9 356 - -
Dod04g1734 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 241 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1734 Dod-Chr4 39802534 39807909 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1734 11 358 Nodulin-like Gene Family AT1G25270 40.974 1.30e-93 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1734 - - gmx:100809587 473.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1734 04 39802534 39807909 Dod03g0127 03 1353669 1356194 PCT
Dod03g0128 03 1360821 1363354 Dod04g1734 04 39802534 39807909 PCT