Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1733 ATGAACGACTTATGTAATGTATTGCAAGGGTTGAAACCAGTCATGCTAATGGTGTTTGTGCAGATTTCATTTGCCGCGGTCAATGTGTTCTACAAGATCGCCATAAGTGATGGAATGAGCATGAGGGTAGCTACCGCCTACCGCCTCGCTTTTGCATCGGCCTTCACTATCCTTCTTGCTCTCATCTTTGATAGGAAGAAGAGACCAAAAATTACTTGGAGAGTGCTTTTTATGGAATTTCTTTGTGGATTGTTTGGCGGAACTTTATTTGTCAACTTCTACTTCGCGGCACTGGCTTTGTTGCCAGCAACGTTTCTGTTGGCCATCATGAACCTTGCTCCAGCCATCACCTTCATCATGGCCATTACCTCCGGTTCGGAAAAATTAAACATGGGAGCAGCAGCCGGAAGGGCCAAGGTAATTGGAACAATAACAGGAATTAGTGGGGCAATGCTGTTGACCTTTTACAAAGGGGTAGAAATTCATATCTGGTCTTCCCATATCAACCTCATGCATCCACATCAGAACCAAAATGGGCACATGCCACCATTACATGCCGACTCTCGCAGCAAATTACTGGGTGTTTCGTATGCCATAGCAAGTTGCTGCTCTTTTTCATTGTGGCTCAACATCCAGGCTAAGACGAATGAAGAATACCCAAGCCATCAAACAGGCACAGCTTTAATGTGCACAATGGCAGCAATACAGTCCACTGTTTTTGCTCTCTGTGTTGACAGGGACTGGAGCCAATGGAGGCTAGGCTGGAATATCAGGCTTCTGGCTGTGGCTTATGCGGGAATTGTGGCCTCTGGAGTGGTGGTTAATATTATTGCATGGTGCGTACGTATGAGAGGCCCTCTATTTGCATCTGTTTTCACCCCTCTACAGCTTGTGCTTGTGGCTATTGCAGCTTCTTTGTTGTTGAATGAGAACTTATATTTGGGAAGTGTGCTTGGAGCAGTGGTGATTGTGTGTGGCCTGTACTCGGTGCTGTGGGGTAATAGCAAAGAAATGAGAAAGAAGATTCAGTTAGTACCATTAGATATGGCTACAGAGTCCGAGATTGTTCAAGTTGAAGTTATGTCCACAGCCGCGCAAATAGATCATGGTAAACGTGAACACAACGAGGAGAGTCAACCCACTACTGCGATGAATGTTTCTAATGATCTCGACAATTTGTCAGAAAATCTGTGTGAAGAACATGATATTCCTAAGAAGGAGAAAGGAGAAGAATTACCCACCTAA 1245 0.4482 MNDLCNVLQGLKPVMLMVFVQISFAAVNVFYKIAISDGMSMRVATAYRLAFASAFTILLALIFDRKKRPKITWRVLFMEFLCGLFGGTLFVNFYFAALALLPATFLLAIMNLAPAITFIMAITSGSEKLNMGAAAGRAKVIGTITGISGAMLLTFYKGVEIHIWSSHINLMHPHQNQNGHMPPLHADSRSKLLGVSYAIASCCSFSLWLNIQAKTNEEYPSHQTGTALMCTMAAIQSTVFALCVDRDWSQWRLGWNIRLLAVAYAGIVASGVVVNIIAWCVRMRGPLFASVFTPLQLVLVAIAASLLLNENLYLGSVLGAVVIVCGLYSVLWGNSKEMRKKIQLVPLDMATESEIVQVEVMSTAAQIDHGKREHNEESQPTTAMNVSNDLDNLSENLCEEHDIPKKEKGEELPT* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1733 414 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 144 - -
Dod04g1733 414 MobiDBLite consensus disorder prediction 379 393 - -
Dod04g1733 414 MobiDBLite consensus disorder prediction 367 414 - -
Dod04g1733 414 Pfam EamA-like transporter family 193 331 IPR000620 GO:0016020|GO:0016021
Dod04g1733 414 Pfam EamA-like transporter family 12 153 IPR000620 GO:0016020|GO:0016021
Dod04g1733 414 PANTHER WAT1-RELATED PROTEIN 12 356 IPR030184 GO:0016021|GO:0022857
Dod04g1733 414 SUPERFAMILY Multidrug resistance efflux transporter EmrE 250 336 - -
Dod04g1733 414 MobiDBLite consensus disorder prediction 394 414 - -
Dod04g1733 414 PANTHER MTN21/EAMA-LIKE TRANSPORTER FAMILY PROTEIN, PUTATIVE-RELATED 12 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1733 Dod-Chr4 39772893 39785705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1733 11 339 Nodulin-like Gene Family AT1G25270 42.857 6.80e-94 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1733 - - gmx:100798755 488.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1733 04 39772893 39785705 Dod03g0128 03 1360821 1363354 PCT
Dod03g0130 03 1463104 1464127 Dod04g1733 04 39772893 39785705 PCT