Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1731 ATGGTTGGGATGGGTCAGAAGGATGCCTATGTAGGTGATGAAGCCCAGTCAAAAAGGGGTATACTGACCTTGAAGTACCCCATAGAGCATGGCATAGTCAGCAACTGGGATGATATGGAAAATATTTGGCATCACACATTTTATGAGCTTCGTGTTGTGCCGGAAGAACACCCGGTGCTTCTTACTGAGACGCCCCTCAATCCTAAGGCCAACAGAGAGAAGATGACCCAAATTATGTTTGAAACCTTCAACGTGCCTGCCATGTATGTTGCCATTCAGGCAGTTTTGTCTCCGTATGCCAGTGGACGTACAACAGGGTGCCCATATATGAAGGCTATGGCCTCGCATGCTATCCTTCGGTTGGACCTTGCTGGTCGTGATTTAACAGAGTACATGATGAAAATTTTAACTGAGAGAGGATACTCTTTCACTACTACTGCTGAACGGGAATTTGTTCGTGATGTGAAGGAGAAACTATCGTCTGTGGCCCTTGATTTTGAACAAGAAATGGAGACCGCTAAGAGTAGTTCTGCCGTGGAGAAGAGCTATGAATTACCTGATAGACAGGGCATTACAATTGGGTCTGAGAGATTCTGA 597 0.4573 MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMENIWHHTFYELRVVPEEHPVLLTETPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSPYASGRTTGCPYMKAMASHAILRLDLAGRDLTEYMMKILTERGYSFTTTAEREFVRDVKEKLSSVALDFEQEMETAKSSSAVEKSYELPDRQGITIGSERF* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1731 198 Gene3D Actin; Chain A, domain 4 129 198 - -
Dod04g1731 198 PRINTS Actin signature 179 195 IPR004000 -
Dod04g1731 198 PRINTS Actin signature 6 17 IPR004000 -
Dod04g1731 198 PRINTS Actin signature 18 40 IPR004000 -
Dod04g1731 198 PRINTS Actin signature 40 58 IPR004000 -
Dod04g1731 198 PRINTS Actin signature 71 84 IPR004000 -
Dod04g1731 198 ProSitePatterns Actins signature 1. 10 20 IPR004001 -
Dod04g1731 198 Pfam Actin 115 198 IPR004000 -
Dod04g1731 198 Pfam Actin 7 107 IPR004000 -
Dod04g1731 198 SMART actin_3 1 198 IPR004000 -
Dod04g1731 198 SUPERFAMILY Actin-like ATPase domain 1 107 IPR043129 -
Dod04g1731 198 Gene3D - 1 122 - -
Dod04g1731 198 PANTHER ACTIN 1 198 IPR004000 -
Dod04g1731 198 CDD NBD_sugar-kinase_HSP70_actin 31 104 - -
Dod04g1731 198 SUPERFAMILY Actin-like ATPase domain 115 198 IPR043129 -
Dod04g1731 198 PANTHER - 1 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1731 Dod-Chr4 39738483 39741425 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1731 1 198 Cytoskeleton Gene Families AT3G12110 81.132 1.41e-119 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1731 K10355 - gmx:100797704 333.954