Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1725 ATGGTTGGAGGTGTTGATGTTCTGGCTGTTGATTCAAGCATGAACGGAGCAGTGGAACGGTTACCTGAGGATTTCAATCCCACAGCGTTGATCAAAGATCTAGTGCCACCCTTGATTAAGGGAGAGAACGGCATTGTCAAGTGTGAGGCTCAGAACACCACAGGAAAAGATGAAAGGAAGATAGTGCTGGGAAGAAACATGCACACCGTTTCCCTTGAAGTCACAGAGCCAGATATCGATGATGAAATCACCGGGGAGAGGGAAGCTTATATGGCAAGTGTTCTGGCCAGATATAAAAAATCTCTCGCAGAAAGGACCAAGTATCATTTAGGTTACCCCTATAATTTGGATTTCGACTATGGTGCACTGTCCCAACTTCAGCACTTCTCCATAAACAACCTGGGAGATCCGTTTATTGAGAGCAATTATGGGGTCCACTCACGGCAGTTTGAGGTTGGTGTTTTGGATTGGTTTGCCAGGTTGTGGGAACTGGAGAAAAATCAGTACTGGGGGTACATAACAAACTGTGGCACTGAAGGGAACCTCCATGGAATCCTAGTTGGGAGAGAGGTGTTCCCAGATGGGATCTTGTATGCCTCACAGGAGTCACATTATTCAGTTTTCAAGGCTGCTCGTATGTACAGAATGGAGTGTGTCAAGGTTGACACTCTTTGTTCTGGTGAGATTGATTGTGATGATTTTAAGGCCAAGCTTCTTTGTCACAAGGACAAGCCAGCAATCGTGAATGTCAACATAGGTACAACTGTGAAAGGAGCCGTGGATGATCTTGATCTGGTTATAAAGACACTTGAAGAAACAGGATTCTCCCATGACAGGTTCTACATCCATTGTGATGGAGCTTTGTTTGGGCTCATGATGCCCTTTGTCAAACGTGCTCCGAAAGTTACTTTTAAAAAGCCTATAGGAAGTGTCAGCGTTTCTGGCCGCAAATTCGTTGGATGCCCCATGCCTTGTGGTGTGCAGATAACACGATTGGAATATATCAACGCGCTTTCCAGGAAGGTAGAATACCTTGCCTCAAGGGATGCCACAATCATGGGCAGTCGTAACGGCCACGCTCCCTTATTCCTATGGCACAGCTTAAACAGGAAAGGCTACAGAGGCTTCAAGAAGGAAGTTGAGAGATGCTTGAGGAATGCACACTACTTCAAAGACCGCTTAGTGGGCGCAGGGATTGGAGCAATGCTTAATGAGCTGAGCAGCACCGTTGTGTTTGAGAGGCCGCATGATGAGGAGTTTGTCCGCAAGTGGCAGCTGGCATGCCAAGGGAACATTGCACACGTTGTGGTGATGCCAAATGTCACCATACAGAAGCTTGATGATTTTCTTAATGAGCTTTTGCAAAAGCGTGCTGTCTGGTTTCAAGATGGCAGGTCTCAGCCTTATTGTATAGCATCTGCTGTTGGCGAAAAGAATTGCCTTTGTGCTTTGCATAGGTAG 1461 0.4634 MVGGVDVLAVDSSMNGAVERLPEDFNPTALIKDLVPPLIKGENGIVKCEAQNTTGKDERKIVLGRNMHTVSLEVTEPDIDDEITGEREAYMASVLARYKKSLAERTKYHLGYPYNLDFDYGALSQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELEKNQYWGYITNCGTEGNLHGILVGREVFPDGILYASQESHYSVFKAARMYRMECVKVDTLCSGEIDCDDFKAKLLCHKDKPAIVNVNIGTTVKGAVDDLDLVIKTLEETGFSHDRFYIHCDGALFGLMMPFVKRAPKVTFKKPIGSVSVSGRKFVGCPMPCGVQITRLEYINALSRKVEYLASRDATIMGSRNGHAPLFLWHSLNRKGYRGFKKEVERCLRNAHYFKDRLVGAGIGAMLNELSSTVVFERPHDEEFVRKWQLACQGNIAHVVVMPNVTIQKLDDFLNELLQKRAVWFQDGRSQPYCIASAVGEKNCLCALHR* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1725 486 Gene3D - 124 367 IPR015421 GO:0003824
Dod04g1725 486 PANTHER - 1 486 - -
Dod04g1725 486 Gene3D Aspartate Aminotransferase, domain 1 368 457 IPR015422 GO:0003824
Dod04g1725 486 SUPERFAMILY PLP-dependent transferases 95 455 IPR015424 -
Dod04g1725 486 PANTHER SERINE DECARBOXYLASE 1 486 - -
Dod04g1725 486 Pfam Pyridoxal-dependent decarboxylase conserved domain 196 398 IPR002129 GO:0016830|GO:0019752|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1725 Dod-Chr4 39696451 39699864 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1725 209 392 Calmodulin-binding Proteins AT1G65960 26.425 1.06e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1725 K25193 - gmx:100785163 859.751