Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1715 ATGGGAGATAACAATGCCAACCTACCACCCGGGTTCCGGTTCTATCCAACTGATGAAGAGCTTGTAGTTCATTTCCTTCACAGAAAGGCAGCCCTTCTCCCTTGCCACCCGGATGTCATCCCTGATCTTGACCTCTACCCTTTTGATCCGTGGGAACTTGATGGTAGAGCTTTGGCAGAGGGAAACCAGTGGTACTACTATAGCAGGAGGACACAAAATAGGGTCACTGCCAATGGTTATTGGAATCCAATGGGAATGGAAGAGCCAGTGGTTTCAAGCTCAAGCAACAAGAGAGTTGGTATGAAGAAATTCTATGTGTTCTATGTGGGAGAAGCCCCTGATGGTAACAAAACCAATTGGATAATGCAAGAGTATCGTCTATCAGATTCTGCATCCTCTAGCAGATCATCCAAAAGAAAAGCACAGCCAAAAACAGATCACAGTAAGTGGGTGATTTGTCGAGTTTATGAGAGTGATGAAAATGATGATAGTGGTGGAACGGAGCTCTCTTGTTTGGATGAAGTTTTCTTGTCATTGGATGATCTTGATGAAATAAGCTTGCCAAATTAG 570 0.4404 MGDNNANLPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLDLYPFDPWELDGRALAEGNQWYYYSRRTQNRVTANGYWNPMGMEEPVVSSSSNKRVGMKKFYVFYVGEAPDGNKTNWIMQEYRLSDSASSSRSSKRKAQPKTDHSKWVICRVYESDENDDSGGTELSCLDEVFLSLDDLDEISLPN* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1715 189 ProSiteProfiles NAC domain profile. 8 158 IPR003441 GO:0003677|GO:0006355
Dod04g1715 189 PANTHER NAC DOMAIN-CONTAINING PROTEIN 104 5 186 - -
Dod04g1715 189 Gene3D NAC domain 17 162 IPR036093 GO:0003677|GO:0006355
Dod04g1715 189 PANTHER NAC TRANSCRIPTION FACTOR 56 5 186 - -
Dod04g1715 189 Pfam No apical meristem (NAM) protein 9 127 IPR003441 GO:0003677|GO:0006355
Dod04g1715 189 SUPERFAMILY NAC domain 5 157 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1715 Dod-Chr4 39616811 39618275 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1715 4 177 NAC Transcription Factor Family AT1G69490 40.659 5.83e-44 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod04g1715 NAM 2.8e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1715 - - gmx:100813096 347.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1715 04 39616811 39618275 Dod03g0144 03 1607530 1609194 PCT