Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1708 ATGATTATGGGTAGAAGTTCCACTGGAGCTATTGCTGGAGGAGTGGCTGCAGGTGCTGCTCTTTTGTTTGCGGCCCCTGCAATTGCACTTGCGTATTGGCGAAGAAGGAAACCACAGGATTATTTCTTTGATGTTCCAGCTGAGGAGGATCCCGAAGTGCACCTTGGCCAGCTTAAAAAGTTTTCACTGCGTGAACTGCAAGTTGCTACAGACAACTTTAGTGGCAAAAACATTCTGGGAAGAGGTGGGTTTGGCAAGGTTTATAAAGGACGCTTAGCCGATGGTTCTCTTGTAGCAGTAAAAAGACTTAAGGAGGAACGCACCCAGGGTGGGGAGCTTCAATTTCAAACTGAAGTGGAAATGATCAGCATGGCTGTGCATCGTAATTTGCTTCGGCTGCAAGGATTTTGTATGACACCTACTGAAAGATTGCTTGTGTATCCTTTCATGGCTAATGGAAGTGTAGCATCTTGTTTACGAGAGCGTCCGGATTCGCAATCACCACTTGACTGGCCAAAACGGAAGGGTATTGCGTTGGGATCTGCTAGGGGGCTTGCTTATTTGCATGATCATTGTGACCCAAAGATTATTCACCGTGATGTCAAAGCTGCTAATATACTGCTGGATGAGGTATTTGAAGCAGTTGTTGGAGATTTTGGTTTAGCAAAGCTGATGGATTACAAAGATACTCATGTTACCACCGCAGTACGTGGTACAATTGGGCATATAGCACCAGAGTATCTCTCAACCGGAAAGTCTTCAGAGAAGACTGATGTTTTTGGATATGGCGTGATGCTTCTTGAACTAATAACTGGACAGAGGGCTTTCGATCTAGCACGACTTGCCAATGATGATGATGTCATGTTGCTTGATTGGGTTAAAGGACTTCTGAAGGACAAGAAGTTGGAGACACTGGTAGATGCAGATTTAGGGGGAAATTATAATGATGAAGAGGTAGAGCAGCTGATCCAAGTGGCCTTGTTATGCACACAAGGCTCCCCTGCAGAAAGGCCTAAGATGTCTGAGGTGGTCAGAATGCTAGAAGGTGATGGTTTGGCAGAGAAATGGGATGAATGGCAGAAAGAGGAGATCACCCGGCAAGAGTTCAACTACAACCATCCTCACCCTGCTAATTGGGGGATATTAGACTCAATTTCAAACGTCCAACCAGATGAACTGTCAGGTCCTAGATGA 1194 0.4548 MIMGRSSTGAIAGGVAAGAALLFAAPAIALAYWRRRKPQDYFFDVPAEEDPEVHLGQLKKFSLRELQVATDNFSGKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLQGFCMTPTERLLVYPFMANGSVASCLRERPDSQSPLDWPKRKGIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEVFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKDKKLETLVDADLGGNYNDEEVEQLIQVALLCTQGSPAERPKMSEVVRMLEGDGLAEKWDEWQKEEITRQEFNYNHPHPANWGILDSISNVQPDELSGPR* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1708 397 PANTHER LRR RECEPTOR KINASE SERK2 6 397 - -
Dod04g1708 397 Gene3D Phosphorylase Kinase; domain 1 42 149 - -
Dod04g1708 397 SUPERFAMILY Protein kinase-like (PK-like) 52 348 IPR011009 -
Dod04g1708 397 Pfam Protein kinase domain 76 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g1708 397 ProSitePatterns Protein kinases ATP-binding region signature. 79 101 IPR017441 GO:0005524
Dod04g1708 397 Gene3D Transferase(Phosphotransferase) domain 1 150 367 - -
Dod04g1708 397 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
Dod04g1708 397 ProSiteProfiles Protein kinase domain profile. 73 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g1708 397 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 6 397 - -
Dod04g1708 397 SMART serkin_6 73 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1708 Dod-Chr4 39542906 39544941 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1708 21 397 Receptor kinase-like Gene Family AT4G33430 88.654 0.0 694
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Dod04g1708 Pkinase 1.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1708 K13416 - sind:105172594 696.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1708 04 39542906 39544941 Dod04g1708 04 39542906 39544941 ECH