Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1706 ATGCCTGGTAAAAGTTCCACTGGAGCTATTGCTAGAGGAGTTGCTGCAGGTGCTGCTCTATTGTTTGCAGCACCTGCAATTGCACTTATGTTTTGGCAAAGAATGAAACAAAGAAAGAAACCACAGGATTATTTCTTGGATGTTCCAGCTGAGGAGGATCCTGAAGTTTACCTTCATCACTGTAAAAAGTTTTCACTGCTTGAGCTGCAAGTCGCTACAGATAACTTTAGTAGCGAAAACATTCTGGGAAGAGGTGGGTCTGCCAAGGTTTATAAAGGATGCTTAGCTGATGGTTCTCTTGTAGCAGTAAAAAGACTTGAAGCAGCACATTTCCGATTTCAGGAGCTTCAATTTCATACTGAAGTGAAAACGACGACCATGGCTGTGCATCGTAATTTGGTTCGGCTGCAAGGATGTTGTTTGACACCTACTGAACAGATGCTTGTGTATCCTTTCATGCCTAATGGAAGTGTAGCATCTTGGTTACACGATCGTCCAGAGTCGCAACCGCCACTTGACTGGCCAAAACGGAAGGGTATTGCACTGGGATCTGCTAGGGGGCTTGCTCATTTGCATGATCATTGTGACCCAAAGATCATACACCGTGATGTCAAACCTCATAATATACTGCTAGATGAGGACTTTGAAGCAGTTGTTGTAGACTTTGGTATAGCAAAGCTGGTGGATTACAAAGATATTATGGATAACGAAGGTATTTCCACCCGTGTATGTGGTACACCTGGGTATATAGCACCAGAGTACATCTCAACCGGAATTGCATCAGAGAGGATTGATGTTTATGGATATGGCGTGATGCTTCATGAACTAATAACTGGACGGAGGGTTATTGAGCTACGAGTTGACGATGATGTGTTCCCTTTACTTGATTGGGTTGAAAGACTTGTGAAGGACAAGAGGTTGGAGACACTGGTGGATGCAGATTTAGGGGTAAATTATGATGATGAAGAGGTAGAGCAGCTGATCCAAGTGGCCCTGTTATGCACACAAATCTCCCCTGCAAAAAGGCCTAAGATGTCTGAGGTGGTCAGAATGCTAAAAGGTGATGGTTTGGCAGAGAAATGGGATGAGTGGCAGAAAGAAGAGATGAAACTGGCAAGTAGATCGGATCTTTGA 1134 0.4392 MPGKSSTGAIARGVAAGAALLFAAPAIALMFWQRMKQRKKPQDYFLDVPAEEDPEVYLHHCKKFSLLELQVATDNFSSENILGRGGSAKVYKGCLADGSLVAVKRLEAAHFRFQELQFHTEVKTTTMAVHRNLVRLQGCCLTPTEQMLVYPFMPNGSVASWLHDRPESQPPLDWPKRKGIALGSARGLAHLHDHCDPKIIHRDVKPHNILLDEDFEAVVVDFGIAKLVDYKDIMDNEGISTRVCGTPGYIAPEYISTGIASERIDVYGYGVMLHELITGRRVIELRVDDDVFPLLDWVERLVKDKRLETLVDADLGVNYDDEEVEQLIQVALLCTQISPAKRPKMSEVVRMLKGDGLAEKWDEWQKEEMKLASRSDL* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1706 377 SUPERFAMILY Protein kinase-like (PK-like) 55 352 IPR011009 -
Dod04g1706 377 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1-RELATED 3 369 - -
Dod04g1706 377 ProSitePatterns Protein kinases ATP-binding region signature. 82 104 IPR017441 GO:0005524
Dod04g1706 377 SMART serkin_6 76 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g1706 377 ProSiteProfiles Protein kinase domain profile. 76 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g1706 377 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 3 369 - -
Dod04g1706 377 Gene3D Phosphorylase Kinase; domain 1 45 152 - -
Dod04g1706 377 Pfam Protein kinase domain 77 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g1706 377 Gene3D Transferase(Phosphotransferase) domain 1 153 372 - -
Dod04g1706 377 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1706 Dod-Chr4 39529242 39532825 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1706 20 369 Receptor kinase-like Gene Family AT4G33430 70.739 1.24e-173 497
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Dod04g1706 Pkinase 7.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1706 K13416 - sind:105172594 493.426