Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1702 ATGGCAGCTACAACATCTGGTGCCGTGTTAAATGGGTTGGGATCTTCCTTCTTATGTGGAGGAAAGAGAAGCCAAACCCTGTTGGCTGCTGCTACTGGAGGCAAAGTTGGTGCATCTGTTAGTCCTACAAGGCTTATTGTGGCAGCTGCTGCTGCTGCTGCACCAAAGAAGTCATGGCTCCCTGGTGTAAGAGGTGGTGGAAATTTCGTTGACCCTGAATGGCTTGATGGCTCGTTGCCAGGTGACTATGGTTTTGACCCACTAGGCCTAGGGAAGGACCCAGCATTCCTCAAATGGTACAGAGAAGCTGAGCTCATTCATGGACGGTGGGCAATGGCTGCAGTTGTAGGCATCTTTGTTGGCCAGGCCTGGAGTGGAGTTCCATGGTTTGAGGCTGGAGCTGACCCTAATGCAATTGCTCCTTTCTCGTTTGGTTCTCTTCTGGGCACACAGTTGCTTCTCATGGGTTGGGTTGAGAGCAAGAGATGGGTTGACTTCTTCAACCCAGACTCACAGTCACTGGAATGGGCCACTCCATGGTCCAGAACTGCTGAGAACTTTGCCAATGCCACAGGGGATCAAGGCTACCCTGGGGGCAAATTCTTTGACCCATTGGGCCTTGCTGGCACACTCAAGGATGGGGTTTACATCCCAGATGCACAGAAGCTAGAGAGGCTGAAACTGGCTGAGATTAAGCATGCTAGGATTGCTATGTTGGCTATGTTGATTTTCTATTTTGAAGCTGGACAAGGGAAGACCCCCCTTGGTGCCCTTGGCTTGTGA 783 0.5121 MAATTSGAVLNGLGSSFLCGGKRSQTLLAAATGGKVGASVSPTRLIVAAAAAAAPKKSWLPGVRGGGNFVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGVPWFEAGADPNAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSLEWATPWSRTAENFANATGDQGYPGGKFFDPLGLAGTLKDGVYIPDAQKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1702 260 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 260 IPR001344 GO:0009765|GO:0016020
Dod04g1702 260 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP24 10A, CHLOROPLASTIC 1 260 - -
Dod04g1702 260 Gene3D Chlorophyll a/b binding protein domain 72 259 - -
Dod04g1702 260 SUPERFAMILY Chlorophyll a-b binding protein 69 260 - -
Dod04g1702 260 Pfam Chlorophyll A-B binding protein 72 248 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1702 Dod-Chr4 39479821 39480707 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1702 1 260 Chloroplast and Mitochondria Gene Families AT1G15820 81.923 1.01e-154 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1702 K08917 - gmx:100500118 490.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1702 04 39479821 39480707 Dod03g0161 03 1789544 1791084 PCT