Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1683 ATGGCGGATCGTGGTTCTTACGGACTCGGTCCTCGATTAGATCTGCAGCAATTACAGTTTGAAGCTCAGCATCGGTGGTTGCGCCCTGCAGAAATATGTGAAATTCTTCGTAATTATAAGATGTTTCATATCACACCAGAGCCACCTAACAGGCCACCGAGTGGTTCACTTTTTCTTTTTGATCGGAAGGTTTTGAGATACTTCAGAAAGGATGGACATAATTGGAGAAAGAAAAAGGATGGAAAGACTGTGAAAGAAGCTCATGAAAAGTTGAAGGTGGGAAGTGTTGATGTGTTACACTGCTACTATGCCCATGGAGAAGAAAATGAAAATTTTCAGAGGCGAAGCTATTGGATGCTTGAACCGGATATGATGCATATAGTATTTGTCCACTACTTGGATGTTAAGGTAAACAAGACCAATATTGGTAGAAACATAGATACTGATGAGGTTACATCAGAGTCCCAAGAGGGAAGTTCTGCATCATCTGGTTTTCCCACAAGTTATAACAGTGTGCCTACACAAAGTTCTGATCCTACACGAAGTTCTGATGCCATGAGCCCGACTAGCACTTTGACGTCTTTATGTGAAGATGCTGATTCTGAGGATATTCGTCAAACTTGTTCTAGACTATACTCTATTTGCGAGTCACATAATATGGGGAATGGTCGTCCGGCAGATAATATTGATGCTCATTCAAATAATTCATATCTTATGCGTCCCTTTTCAGGTGATCATGGACTGTCAACAATTTCTGGAACAAATTTTGTCCCACTTGTCCAAGGGGATCAATCTAGAGTAAGTGGTACTACTTACATTGAGGGCCAGAAATCACATAGCGTGGCAACCTGGGACAATACCATGGAGCAATCCACGGGATTGAATACTGAACCTTCTTTTGCATCATTTCCTTCCATTTCATCCAGTCCAGTAGGAAACACCCTTGAACAGGAACATACTTTTCTGGGCAACCTTTTAGGGAGTAAAAGTGCCCTCAGTGAGGTGGCACAGGTTTCTCATTCTCTTCAATCAAATTGGCAGATTCCTTTTGAAGACAACACTGGACACTTGCCCAAATGGAGCTTAACCCAATCATTGAATTTGGAATTTGGATCTGATTATAGCGCAGGTTTACTGGGGGGTGAAACTTACAAAGCAAGCCCAGAGATTGCTCCTGACCTGTTCACTTCTAATGGGGAGCTAAAAGAGCAGCCTGCGCAGCAAAACTTCTCAAAGCAGCATACAGATGCACAATCACAATGTGCATCAAAATCCAATTCTGAGAATGAAGTTCCTCCGGAAGAAAGTATCAACTATTCCTTGACTGTGAAGCGTGCATTATTGGATGGAGAGGAGGGCCTGAAGAAGGTTGATAGCTTCTCTAGGTGGATTACTAAAGAACTTGCAGAGGTGGATGATCTGCACATGCAGTCTTCCCCTGGTATTTCGTGGAACACAGATGAATGTGGGCATGTGATAGATGATACATCATTGAACCTGTCCCTATCTCAAGATCAGCTGTTTAGTATAAATGATTTTTCACCTAAATGGGCTTATGCTGATTCAGAAATCGAGGTGTTGATTATTGGAGCATTTTTGAAGAGTCAACCCGAGGTGGCAACTTGTAACTGGTCCTGTATGTTTGGGGAAGTGGAGGTTCCCGCTGAGGTTTTAGCCAATGGAATAATGTGCTGTCGAGCTCCACCTCATACGATTGGACGGGTGCCTTTCTATGTGACATGTTCCAATAGGTTTGCTTGTAGTGAAGTGAGGGAGTTTGAGTACAGAGAAGGCTGTGCTAAAAATGTAGATTTCACAGATTTCTTTGACAGTTCAACTGAAATGATGCTTCATTTGCAACTTGAGGATCTACTTTCTTCAAAATCAGTGCACCCTTCAAATCAAGACTTTGAGGTTTATAGGGAGATAAGAAACAAAATTTTTAAGCTTATTTCAATGAAAGAGGAAGAGGAATATTCGAGTAAGGAAGAGCCAGCTGCACGGATGGATATATCACAACACAAGTTGGAGGAGCATATGTTTCAAAGGCAGGTTAAAGAAAAGCTGTATTCGTGGCTTCTTCACAAGGTAACTGAAGACAGTAAAGGGCCAAATGTGTTGGATAAGGATGGACAGGGTGTATTACATTTAGTTGCTGCTCTTGGTTATGACTGGGCCATCGCACCAGTTATAATGTCTGGAGTTAATATCAACTTCCGTGATGTGAATGGATGGACGGCTCTACATTGGGCTGCATCCTGTGGCAGAGAGCGAACAGTTGCTGTTCTTGTCTCCATGGGTGCATCTGCTGGAGCATTGACGGATCCATGTCCAGAATTTCCTCGTGGTAGAACACCTGCTGATCTTGCTTCTAGCAATGGCCACAAAGGAATCTCTGGTTTTCTTGGGGAGTCATTGTTAACTAGCCACCTTGAATCACTTAAAGTGGATGATCTAAATGAAGATGGTAGGAAAGAAACTTCAGGAGAGAAAGCGGTGCAGACAGTTTCAGAGCGAAGTGCGACGCCTTTTATTTATGGTGATATGCCAGATGCGCTCAGCCTAAAGGATTCTCTTACTGCTGTCCGTAATGCTACACAAGCTGCTGATCGTATACATCAAGTGTTTAGGTTGTATTCATTTCACAGGAAGCAGTTAGCTCAGCATGAAGACGATGAATTTGGGTTGTCAGAGCAGCAAGCTCTTTCGCTTCTGGCTTCTAGGGCTTCCAAATTTGGACAAGGAGAGGGTTTAGCTAATGCTGCTGCAGTACAAATACAGAAAAAGTTCCGTGGTTGGAAGAAGAGAAGAGAATTCCTGGTCATTCGTCAACGAATTGTCAAAATCCAGGCTCATGTAAGAGGGCATCAGGTAAGAAAGCAGTATAAATCAGACATCCTCTGGTCCGTGGGAATCCTAGAGAAGGTCATATTACGCTGGAGACGTAAGGGCAGTGGTTTACGTGGATTTCGACCAGATACCCTTAATAGGGTCCCCAACCAACCGGAGCGATCCTCCGCAAGAGGATGA 3030 0.4323 MADRGSYGLGPRLDLQQLQFEAQHRWLRPAEICEILRNYKMFHITPEPPNRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEENENFQRRSYWMLEPDMMHIVFVHYLDVKVNKTNIGRNIDTDEVTSESQEGSSASSGFPTSYNSVPTQSSDPTRSSDAMSPTSTLTSLCEDADSEDIRQTCSRLYSICESHNMGNGRPADNIDAHSNNSYLMRPFSGDHGLSTISGTNFVPLVQGDQSRVSGTTYIEGQKSHSVATWDNTMEQSTGLNTEPSFASFPSISSSPVGNTLEQEHTFLGNLLGSKSALSEVAQVSHSLQSNWQIPFEDNTGHLPKWSLTQSLNLEFGSDYSAGLLGGETYKASPEIAPDLFTSNGELKEQPAQQNFSKQHTDAQSQCASKSNSENEVPPEESINYSLTVKRALLDGEEGLKKVDSFSRWITKELAEVDDLHMQSSPGISWNTDECGHVIDDTSLNLSLSQDQLFSINDFSPKWAYADSEIEVLIIGAFLKSQPEVATCNWSCMFGEVEVPAEVLANGIMCCRAPPHTIGRVPFYVTCSNRFACSEVREFEYREGCAKNVDFTDFFDSSTEMMLHLQLEDLLSSKSVHPSNQDFEVYREIRNKIFKLISMKEEEEYSSKEEPAARMDISQHKLEEHMFQRQVKEKLYSWLLHKVTEDSKGPNVLDKDGQGVLHLVAALGYDWAIAPVIMSGVNINFRDVNGWTALHWAASCGRERTVAVLVSMGASAGALTDPCPEFPRGRTPADLASSNGHKGISGFLGESLLTSHLESLKVDDLNEDGRKETSGEKAVQTVSERSATPFIYGDMPDALSLKDSLTAVRNATQAADRIHQVFRLYSFHRKQLAQHEDDEFGLSEQQALSLLASRASKFGQGEGLANAAAVQIQKKFRGWKKRREFLVIRQRIVKIQAHVRGHQVRKQYKSDILWSVGILEKVILRWRRKGSGLRGFRPDTLNRVPNQPERSSARG* 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1683 1009 MobiDBLite consensus disorder prediction 147 199 - -
Dod04g1683 1009 Pfam IQ calmodulin-binding motif 944 963 IPR000048 GO:0005515
Dod04g1683 1009 Pfam IQ calmodulin-binding motif 921 939 IPR000048 GO:0005515
Dod04g1683 1009 MobiDBLite consensus disorder prediction 404 436 - -
Dod04g1683 1009 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 1 1 1005 - -
Dod04g1683 1009 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 920 963 IPR027417 -
Dod04g1683 1009 ProSiteProfiles Ankyrin repeat profile. 743 775 IPR002110 GO:0005515
Dod04g1683 1009 MobiDBLite consensus disorder prediction 147 197 - -
Dod04g1683 1009 ProSiteProfiles IQ motif profile. 919 948 IPR000048 GO:0005515
Dod04g1683 1009 SUPERFAMILY Ankyrin repeat 703 802 IPR036770 -
Dod04g1683 1009 SMART CG_1_2 18 136 IPR005559 GO:0003677
Dod04g1683 1009 Gene3D - 672 812 IPR036770 -
Dod04g1683 1009 ProSiteProfiles CG-1 DNA-binding domain profile. 15 141 IPR005559 GO:0003677
Dod04g1683 1009 SMART ANK_2a 743 772 IPR002110 GO:0005515
Dod04g1683 1009 SMART ANK_2a 782 811 IPR002110 GO:0005515
Dod04g1683 1009 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 1 1005 - -
Dod04g1683 1009 Pfam IPT/TIG domain 510 595 IPR002909 -
Dod04g1683 1009 Gene3D - 919 965 - -
Dod04g1683 1009 Gene3D Immunoglobulins 503 599 IPR013783 -
Dod04g1683 1009 SMART iq_5 918 940 IPR000048 GO:0005515
Dod04g1683 1009 SMART iq_5 941 963 IPR000048 GO:0005515
Dod04g1683 1009 ProSiteProfiles IQ motif profile. 942 966 IPR000048 GO:0005515
Dod04g1683 1009 SUPERFAMILY E set domains 510 596 IPR014756 -
Dod04g1683 1009 ProSiteProfiles Ankyrin repeat region circular profile. 743 769 - -
Dod04g1683 1009 Pfam CG-1 domain 21 134 IPR005559 GO:0003677
Dod04g1683 1009 Pfam Ankyrin repeats (3 copies) 715 798 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1683 Dod-Chr4 39298807 39307888 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1683 1 1002 CAMTA Transcription Factor Family AT5G64220 51.349 0.0 969
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Dod04g1683 CG-1 2.2e-51 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1683 K21596 - gmx:100795682 1526.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1683 04 39298807 39307888 Dod03g0178 03 1910075 1919598 PCT