Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1680 ATGATAGAGGAGAAAAGTGAGGTGGGGCTGAATTATATGGATAGTCTCTGTTGCTTCAGCTCTGTTAGTCAGGTGGTTGGAGGACGTTCTTCATGTAACTCAGGAAAGGGCAAGAGCAATCAGTCCTCGGCCAAGTATGGCTTTAGCCTTGTCAAAGGGAAAGCAACCCACCCTATGGAGGACTATCATGTAGCAAAATTTGTCCCATTCAAAGGGCAAGAGCTGGGACTTTTTGCTGTATATGATGGCCACTTGGGAGATAGTGTACCAGCCTATTTACAAAAGCATCTCTTTTCCAATATCTTGAAGGAAGAGGACTTTTGGGAAGATCCATTCATGTCCATTTCTAAAGCTTATGAGACAACAGATCAGGCAATTCTTTCTCACAGTCCTGATTTGGGGCGAGGAGGATCGACTGCTGTGACTGCAATTCTCATAAATAATCAGAAACTATGGGTAGCCAATGTTGGAGATTCACGAGCAGTTCTGTCAAGGGGAGGGGTGGCTGTACAGATGACTACTGATCATGAACCCAACACCGAGCGGGGCAGCATCGAGAACAGAGGTGGCTTTGTCTCAAACATGCCAGGAGATGTTGCAAGGGTGAATGGGCAGCTTGCAGTTTCTCGAGCATTCGGAGACAAAAACCTCAAAACACACTTGCGATCTGATCCTGACATCCAGTATGCTGACATTACCCCAGATATTGAGCTTTTGATACTTGCTAGTGATGGTCTATGGAAGGTTTCCTATCAATCTCTCTGTGTCGAATTATTTCTTAAAGGAAAAAAAAAAAAAAAGATGCACTTTTCATCACATAACTTTGCCGTAGGTTTCAGTTTTTGCCCCACAGGCCATATCCTGCTTCATTCTCTTCCCAAAATTCAACATATTTGTCTCACCACTAACTCTGTCCTGAAATGCTGCCAGTGGCATCCTATGCGAGCATGTGTAAAATTGGATATGTGCGCCATCCGGACAAATTTGACAAGTTTTGAAAAGATTTAG 1008 0.4385 MIEEKSEVGLNYMDSLCCFSSVSQVVGGRSSCNSGKGKSNQSSAKYGFSLVKGKATHPMEDYHVAKFVPFKGQELGLFAVYDGHLGDSVPAYLQKHLFSNILKEEDFWEDPFMSISKAYETTDQAILSHSPDLGRGGSTAVTAILINNQKLWVANVGDSRAVLSRGGVAVQMTTDHEPNTERGSIENRGGFVSNMPGDVARVNGQLAVSRAFGDKNLKTHLRSDPDIQYADITPDIELLILASDGLWKVSYQSLCVELFLKGKKKKKMHFSSHNFAVGFSFCPTGHILLHSLPKIQHICLTTNSVLKCCQWHPMRACVKLDMCAIRTNLTSFEKI* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1680 335 Gene3D - 29 274 IPR036457 -
Dod04g1680 335 ProSiteProfiles PPM-type phosphatase domain profile. 45 335 IPR001932 -
Dod04g1680 335 Pfam Protein phosphatase 2C 54 267 IPR001932 -
Dod04g1680 335 SMART PP2C_4 41 335 IPR001932 -
Dod04g1680 335 CDD PP2Cc 45 255 IPR001932 -
Dod04g1680 335 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 13 267 - -
Dod04g1680 335 PANTHER PROTEIN PHOSPHATASE 2C 13 267 IPR015655 GO:0004722|GO:0006470
Dod04g1680 335 SUPERFAMILY PP2C-like 42 261 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1680 Dod-Chr4 39283317 39289717 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1680 13 250 PP2C-type Phosphatase Gene Family AT1G34750 73.222 1.81e-125 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1680 K17506 - gmx:100801722 452.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1680 04 39283317 39289717 Dod03g0179 03 1921727 1926906 PCT