Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1631 ATGTATCACCTTTTCAAAATGGTGCACTCATCCGTTTTCTTCCTCTTGATCAGCATCCCGTTTGCATGTTCCTTATCCTTTAGCTTCACCAATTTTGATCCCAACAACAAGAACATAATATACGAGGGATCAGCAACATGTGCACCACCAGATATCCAACTCACAACAAACCAGCTGAACAAGAACTTGGACAATAGCACTGGTCGAGCCACATACTCCCATCCCATGCTCTTGTGGGACAAAGCTACAAGGAGCCTCACAGATTTCACAACCCATTTTAAATTTGTCATAAATTCAGTACAGAACCGAAGTGTTTGTGGAGATGGGATTGCATTCTTCCTTGCCCCTGTTGGTTCAAAGATCCCAACTGACTCGAAAGGAGGTGGTATGGGTCTGGCACTTTACAATGAAAAACTGAACTCAACTGACAATCCATTTGTTGCCGTGGAGTTTGATATCTTCCCAAATCGAGGCTGGGATCCACCCTATAAACATGTTGGCGTTGACGTCAACTCCATCAAGTCTGTTACTGATGTGAAATGGTTGGTTGATATCGAGAAAGGACGGCGCAATGAGGCTTGGATCAGTTACAATGCCACTTCACAAAATTTAAGTATTTCGTTCGCTAGTTTTTACAACGGCACCATCCTGCCGCAACATCTATCTCTCAAAGTTGACTTGAGAGATCATCTGCCAGATATGGTTACTTTTGGCTTCTCAGCCGCCACAGGAAAGTCAACTGCTATACACAGCATCCTTTCATGGGATTTTAGCTCATCTTTGGAAGCACAACAAAAGGCCAATATGGGGATTCCCACTCAGAAGAAAGGGTCCAAGACGGGAAGACTAGCAGTGGGATTGGGTGTTGGAGGGTTCGTAATTTTGATTGGTGGATTGGGTTTGGTTTCAATTGGCTTGTGGAAGAAGTGGAAGCATGGAATTGATGAGGATGATGATAAAGCTTTTGAAGAGTATATGGGGGAGGATTTTGGAAAGAGTACAGGACCCCGGAAGTATTCATACGCTGAATTAGCGGATGCAGCCAATAATTTCAAAGATGAGCACAAGCTAGGACAGGGAGGATTTGGAGCTGTCTATAGCGGGTACCTTAAAGACTCAAACTCTCATGTTGCCATTAAGAGGGTGTCAGAAGGTTCTCATCAAGGGATAAAGGAATTCGCATCAGAAGTAAGAATTATTAGTCGGTTAAGGCATCGAAATCTTGTGCAGCTGATTGGTTGGTGTCACGAAAGAAAGAAGCTCTTGCTTGTGTATGAGTACATGCCAAATGGAAGCCTAGACGTTCATCTTTTCAAGAAACAAAGTTCGCTGAAATGGCCAGCAAGATACAACATAGCTCGAGGCTTGGCTTCTGCGTTGCTATACTTGCATGAAGAATGGGAACAATGTGTTGTACACAGGGATATAAAATCAAGCAACATTATGCTAGATTCAGAGTTCAATGCAAAGCTTGGGGATTTCGGTTTAGCAAGGCTTGTGGACCATGCAAAAGGTGCACAAACTATGACTTTAGCTGGGACTATGGGTTACATGGCTCCTGAATGCAGTACCACGGGACGGGCTAGTAAGGAATCAGATGTCTACAGTTTTGGGATTGTAGCTTTGGAGATAGCTTGTGGAAGAAAACCCATCGATTATAAGGTCCCAGATGATGAATTAAACATTGTAGAGTGGGTTTGGGGTCTATATGGAAGAGGTAGAATTCTTGAAGCAGCAGATCCAAGGCTAGGTGGAGACTTTGAGGAAGACCAAATGAAACACTTGATGGTTGTTGGTCTTTGGTGTGCTCACCCTGATCATAATAATAGGCCTTCAATAAGGCAAGCAATTCAAGTGCTTAGCTTTGAAGTCCCCTTGCCTAATCTTCCATCAAGTTTGCCTGTACCAACCTATCTTGAGCGCCCATTGAACTCAGCCCTTGCTCCACTCAGCATAACTGGCTCAGATGAAGGCCAATCCCAGACCATAATAAGCTTTAGTTTAAACACAAACTCCTCTGGCGGGGTCACCACGACTTCTGATGATGTTTCTTCCTCTACGTCACTTCTGTATTCATGA 2079 0.4382 MYHLFKMVHSSVFFLLISIPFACSLSFSFTNFDPNNKNIIYEGSATCAPPDIQLTTNQLNKNLDNSTGRATYSHPMLLWDKATRSLTDFTTHFKFVINSVQNRSVCGDGIAFFLAPVGSKIPTDSKGGGMGLALYNEKLNSTDNPFVAVEFDIFPNRGWDPPYKHVGVDVNSIKSVTDVKWLVDIEKGRRNEAWISYNATSQNLSISFASFYNGTILPQHLSLKVDLRDHLPDMVTFGFSAATGKSTAIHSILSWDFSSSLEAQQKANMGIPTQKKGSKTGRLAVGLGVGGFVILIGGLGLVSIGLWKKWKHGIDEDDDKAFEEYMGEDFGKSTGPRKYSYAELADAANNFKDEHKLGQGGFGAVYSGYLKDSNSHVAIKRVSEGSHQGIKEFASEVRIISRLRHRNLVQLIGWCHERKKLLLVYEYMPNGSLDVHLFKKQSSLKWPARYNIARGLASALLYLHEEWEQCVVHRDIKSSNIMLDSEFNAKLGDFGLARLVDHAKGAQTMTLAGTMGYMAPECSTTGRASKESDVYSFGIVALEIACGRKPIDYKVPDDELNIVEWVWGLYGRGRILEAADPRLGGDFEEDQMKHLMVVGLWCAHPDHNNRPSIRQAIQVLSFEVPLPNLPSSLPVPTYLERPLNSALAPLSITGSDEGQSQTIISFSLNTNSSGGVTTTSDDVSSSTSLLYS* 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1631 692 ProSiteProfiles Protein kinase domain profile. 351 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g1631 692 SUPERFAMILY Protein kinase-like (PK-like) 335 636 IPR011009 -
Dod04g1631 692 PANTHER RECEPTOR LECTIN KINASE 13 688 - -
Dod04g1631 692 Gene3D Transferase(Phosphotransferase) domain 1 428 640 - -
Dod04g1631 692 CDD STKc_IRAK 357 620 - -
Dod04g1631 692 Gene3D - 23 272 - -
Dod04g1631 692 ProSitePatterns Protein kinases ATP-binding region signature. 357 380 IPR017441 GO:0005524
Dod04g1631 692 SUPERFAMILY Concanavalin A-like lectins/glucanases 22 266 IPR013320 -
Dod04g1631 692 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
Dod04g1631 692 CDD lectin_legume_LecRK_Arcelin_ConA 25 261 IPR001220 GO:0030246
Dod04g1631 692 Pfam Legume lectin domain 24 268 IPR001220 GO:0030246
Dod04g1631 692 PANTHER - 13 688 - -
Dod04g1631 692 Pfam Protein kinase domain 351 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g1631 692 SMART serkin_6 351 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g1631 692 Gene3D Phosphorylase Kinase; domain 1 336 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1631 Dod-Chr4 38458685 38460863 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1631 12 638 Receptor kinase-like Gene Family AT5G10530 48.137 0.0 557
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Dod04g1631 Pkinase 3e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1631 - - gmx:100817743 925.235