Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1628 ATGTGTGTCCGGTTGCCAAATCCTAACTTCCCATTCCCATATCACTTCCTAGCGATGATGCTGTTATCCATTTTCTTCCTCTTGGTTATCCCACGTACCCATGCATCTCCCTTATCCTTTAACTACACTAGTTTTGATCCCAATGAGAGGAATATACATTATGAGGGATCAGCAACCCCTGTAGAGTCAGCAATCCAACTCACGAGAAACCAGGCGGGCAAGACCATGTTGTTTAGCAGTGGTCGAGCCACTTACTCCCAGCCCATGCACTTGTGGGACAACGTGACAAGGAATCTCGCAGATTTCACAACCCATTTTACCTTCATCATAGATTCACAGAACCAAAATGTATCAGCAGATGGGCTTACATTCTTCCTTGCCCCTGCTGGTTCAAAGATCATAGCAAACGCCACATTAGGAAGTTCTATGGGTCTGACGTCATTTAATAATCAAACAGCACTGAGTCCAACTGTTGCTGTGGAGTTTGATATCTTCAAAAATTACTGGGATCCCAACTACACACATGTGGGTGTTGACATCAACTCCTTAGAGTCCGCTGTTAATACGCCATGGTTGGCAGATATCAAGCAAGGAATGCTCAATGAGGCTTGGATCAATTACAATAGCACTTCGCTAGAATTAAGCGTGTCAGAAGATTCTGAGCAAGGGATAAAGGAATTTGCATCAGAAGTAAGAATTATTAGCCGGTTAAGGCATCGAAATCTTGTGCAGTTAATTGGTTGGTGTCACGAAAGAAAAAACCTCTTGCTTGTATATGAATACATGCCTAATGGAAGCCTAGATGTTCATCTTTTCAAGACACAAAGTTTGCTGAAATGGGCAGTGAGGTATAACATAGCTCGAGGCTTAGCTCTCGCATTGCTATATTTGCACGAAGAATGGGAACAATGTGTTGTACATAGGGACATAACATCAAGCAACATTATGCTAGATTCAGAGTTCAATGCAAAGCTTGGGGATTTCGGTTTAGCTAGGCTTGTGGACCATGCAAAAGGTGCACAGACTACGGCTTTAGCTGGGACTATGGGCTACATGGCTCCTGAATGCAGTCACACGGGGCGAGCAAGTAAGGAATCAGATGTATACAGTTTTGGAGTTGTAGCTTTGGAGATAGCTTGTGGAAGAAAACCCATCGACCATAACGCCCCAGAAAATGAAATAAACATTGTAGCATGGGTTTGGGACCTTTATGGAAGAGGGAGAATTCTTGAAGCAGCAGATCCAAGGCTAGGAGGAGATTTTGAGGAGGACCAAATGAAACACTTGATGGTTGTTGGTCTTTGGTGTGCTCACCCTGATCATAATAATAGGCCTTCAATAAGGCAAGCAATTCAAGTGCTTAGCTTTGAAGTCCCCTTACCTAATCTTCCATCAATTTTGCCTATACCAACTTATCTTGAGCGCCCATTGAACTCAGCCCTTGCTTCACTCAGCACAACTGGCTCTGAGAAGACCAATCCCAGAACATAA 1491 0.4359 MCVRLPNPNFPFPYHFLAMMLLSIFFLLVIPRTHASPLSFNYTSFDPNERNIHYEGSATPVESAIQLTRNQAGKTMLFSSGRATYSQPMHLWDNVTRNLADFTTHFTFIIDSQNQNVSADGLTFFLAPAGSKIIANATLGSSMGLTSFNNQTALSPTVAVEFDIFKNYWDPNYTHVGVDINSLESAVNTPWLADIKQGMLNEAWINYNSTSLELSVSEDSEQGIKEFASEVRIISRLRHRNLVQLIGWCHERKNLLLVYEYMPNGSLDVHLFKTQSLLKWAVRYNIARGLALALLYLHEEWEQCVVHRDITSSNIMLDSEFNAKLGDFGLARLVDHAKGAQTTALAGTMGYMAPECSHTGRASKESDVYSFGVVALEIACGRKPIDHNAPENEINIVAWVWDLYGRGRILEAADPRLGGDFEEDQMKHLMVVGLWCAHPDHNNRPSIRQAIQVLSFEVPLPNLPSILPIPTYLERPLNSALASLSTTGSEKTNPRT* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1628 496 PANTHER RECEPTOR LECTIN KINASE 217 486 - -
Dod04g1628 496 PANTHER RECEPTOR LECTIN KINASE 22 216 - -
Dod04g1628 496 Gene3D - 35 213 - -
Dod04g1628 496 PANTHER - 217 486 - -
Dod04g1628 496 PANTHER - 22 216 - -
Dod04g1628 496 Pfam Protein kinase domain 217 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g1628 496 ProSitePatterns Tyrosine protein kinases specific active-site signature. 305 317 IPR008266 GO:0004672|GO:0006468
Dod04g1628 496 CDD lectin_legume_LecRK_Arcelin_ConA 38 217 IPR001220 GO:0030246
Dod04g1628 496 SUPERFAMILY Protein kinase-like (PK-like) 220 456 IPR011009 -
Dod04g1628 496 Gene3D Transferase(Phosphotransferase) domain 1 263 473 - -
Dod04g1628 496 Pfam Legume lectin domain 38 218 IPR001220 GO:0030246
Dod04g1628 496 ProSiteProfiles Protein kinase domain profile. 189 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g1628 496 SUPERFAMILY Concanavalin A-like lectins/glucanases 36 220 IPR013320 -
Dod04g1628 496 Gene3D Phosphorylase Kinase; domain 1 214 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1628 Dod-Chr4 38416661 38418720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1628 220 472 Receptor kinase-like Gene Family AT5G10530 65.625 3.65e-117 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Dod04g1628 Pkinase 1.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1628 - - gmx:100782344 471.085