Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1619 ATGGAGAACTATTCATACCCGTCGTATCCGGACTCCGGTGACTCGTCGCCGCGCTCGAGGGAGATCGACTTCGAGAACCCGCCGCCGTGGGACGAGCAGCAGCCGCCGGCGAACTACAAGGCGAAGTTCATGTGCAGCTACGGCGGCAAGATCCAGCCCCGCACCCACGACAACCAGCTCTCCTACGTGGGCGGAGACACCAAGATCCTCGCCGTCGACCGCAACATCAAGTTCCCCGCCTTCCTCTCAAGGCTTGCGGCCGTCTGCGACTCCCCTTCCACGGAGAACCTCACGCTCAAGTACCAGCTTCCAGGGGAGGACCTCGACGCTCTCATCTCCGTCACCAACGACGACGACCTCGACCACATGATGCACGAGTACGACCGCCTCTTCCGCGCCTCCGCCAAACCCGCCAGGATGCGCCTCTTCCTCTTCGCCGCTGCAACTAACTCCGCTCCGCCGAGCTTCTCCGATCGCGATCGCTTCGTTGAGGCTCTTAACTCGGGTCCTGTTCCGGTTCAACCCGACCCGGTCAAACGTCCTCCTGTTGCGCCTAGCAACGTCGATTACCTCTTCGGGATCGAGAAGGCCGTTGCTCCTCCAGCTCAGCCGGCGCCGCCGCTTGCTGCCGTGAAGTTCCACGATCCGGGGCCGGAGCCTGCAGCTCCGCCGCCGGAGTATCAGTCTCGTGGAGCGGTGAGTGATCGGGTGATCGGATCGGATCCGAACGTGAACTCTATCGAGGTTCAGAGGCAGTTGCAGCAGGAACTGCAGCGGTTGCAAATCGCCGAGAGTGATCAGTCTATGTACAGGAGGAGAAGCGAGGAAGGCTTTGCCGGAGGTTACGGCGTCACCGGCGGAGGGGATTATTACTTGCAGAAGGCGGCCGAGAAAGTTCAGTTGTCCAATTCACCGGCTACGGTTCCCCACCCTGCGAATTACTGGCCGGAGAAGCAATTCTCCGGCGAAGGTTTCCCGGCGGCAGTGACATCTGCTCCCGGAGGAGTAGACCAGCAGTTTTACGTTGTTCCTGGGCCGGGGACGTTCTATCACGCGCCGGTGGTACGTCCTGCGGCGGCGGCGCCGGTCACTCAAGGTTACTACGCGGTGCAGCGTATGGGTTCTGAAGGCTACCGTGAGCAGCCGGTGTACGGCGGCATGCCGCCTCCTAAAGCAGCGTTTTCGTCGGCGGGGCCAACGAATTTGGCACCGGCGCAGCCGGTTAAGGCTTCCGGTTACTCGGAAGGATACGGCGTCGTTCGACCAGCTGGAGTGCCGGATAATGCGGGCGGTGCTGCGTACGCGCAGGTGGCGTACGATAGCGCTAGTGGGAGACAGGTTTACTATACTGCGCAGGGTGGCGTGGTGCACGCGCCGCCGTACCAAGGGGTTGCTCCGGCGGTTAGTGGTGATGTGAGAACCGCTGCTGGGGTTTCATTGGGCCACGATGTTAATAAAGTGGTAAACAAGGCTTCCCAAGGTTCAGTGTGA 1491 0.6137 MENYSYPSYPDSGDSSPRSREIDFENPPPWDEQQPPANYKAKFMCSYGGKIQPRTHDNQLSYVGGDTKILAVDRNIKFPAFLSRLAAVCDSPSTENLTLKYQLPGEDLDALISVTNDDDLDHMMHEYDRLFRASAKPARMRLFLFAAATNSAPPSFSDRDRFVEALNSGPVPVQPDPVKRPPVAPSNVDYLFGIEKAVAPPAQPAPPLAAVKFHDPGPEPAAPPPEYQSRGAVSDRVIGSDPNVNSIEVQRQLQQELQRLQIAESDQSMYRRRSEEGFAGGYGVTGGGDYYLQKAAEKVQLSNSPATVPHPANYWPEKQFSGEGFPAAVTSAPGGVDQQFYVVPGPGTFYHAPVVRPAAAAPVTQGYYAVQRMGSEGYREQPVYGGMPPPKAAFSSAGPTNLAPAQPVKASGYSEGYGVVRPAGVPDNAGGAAYAQVAYDSASGRQVYYTAQGGVVHAPPYQGVAPAVSGDVRTAAGVSLGHDVNKVVNKASQGSV* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1619 496 MobiDBLite consensus disorder prediction 1 35 - -
Dod04g1619 496 Pfam PB1 domain 56 146 IPR000270 GO:0005515
Dod04g1619 496 Gene3D - 61 146 - -
Dod04g1619 496 SMART PB1_new 55 147 IPR000270 GO:0005515
Dod04g1619 496 MobiDBLite consensus disorder prediction 1 15 - -
Dod04g1619 496 MobiDBLite consensus disorder prediction 203 225 - -
Dod04g1619 496 MobiDBLite consensus disorder prediction 203 241 - -
Dod04g1619 496 CDD PB1_UP2 44 145 - -
Dod04g1619 496 PANTHER OS05G0427100 PROTEIN-RELATED 1 487 - -
Dod04g1619 496 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P (PB1) DOMAIN PROTEIN 1 487 - -
Dod04g1619 496 SUPERFAMILY CAD & PB1 domains 56 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1619 Dod-Chr4 38270074 38271824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1619 40 167 MAP Kinase Kinase Kinase AT3G46920 42.029 1.44e-27 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1619 - - adu:107480527 776.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1619 04 38270074 38271824 Dod03g0255 03 2709775 2711957 PCT