Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1613 ATGGCACAGTTCGTAGGAATCCTGCCTCAGAAAATTTGTTCAAAAGCACCCCTTTCGCTGTTCCATCATTTTCTGGAAGTAAAGGATTCTACTTCTCAAAGTCTAGGCCATTACGTTGGGAACGGACTGCAGACAAATGTGGCATATGATGTTGCTGGTGCTGTGGAAGTCATCAATGATTTAGGATTGGATACTCTTACTTTCTTGGGTGTGACTGTCTTTATTGTACCCACATTCAAGTCAATTAAAGCCAGTCCTATACTTGGTTTCTTCTTTGCTGGGGTGGTACTCAATCAGTTTGGTTTAATTAGAAACCTTACGGATGTTAAAGTTTTGTCTGAATGGGGGATCCTTTTCTTGTTGTTTGAGATGGGTTTAGAGCTTTCACTTGCACGACTGAAAGCTCTTGCAAAATATGCCTTTGGCATGGGATTGGCTCAGGTTGTGCTATCTACTTTAGCATTTACTGCTTTTGAACTTCCACCAAATGGGGCTGTTGGAACAAAAATTTTGGAATTCCTTTTTCACTCAAGGCCTGATCTGGTGAACATCAGAAGCGTCGATGAAGCTGTGGTGATTGGTGCTGCTCTCTCTCTCTCGTCTTCTGCATTTGTTCTACAGCTTCTTGCTGAGAAAGGTGAGCTTCCTACCAGATTTGGTTCAGCGACTCTGGGAATACTTCTTTTGCAGGACTTAGCTGTTGTCCCTCTTTTAGTCATTCTTCCAATACTGGAGACCCAGAATGTGTCTGAGGGAAGTGTTTGGCCCATGTTGGCTCAAGAAAGTTTAAAGGCATTAGGTGGATTGGGTCTTCTTTCTCTTGGGGCAAAGTACATTCTCAGAAGAGTTTTTGAGGTTGTTGCAGATACAAGGAGCTCGGAGGCTTTTGTTGCTCTTTGCTTGCTGACTGTTGCTGGGACTTCTTTAGTCACTCAGCATTTGGGCTTTAGTGATACGCTTGGAGCATTTTTAGCTGGGGCAATATTAGCTGAGACAAATTTCAGGACCCAGATTGAAGCTGACATTAGACCGTTTAGAGGCTTGCTTCTTGGGTTATTTTTTCTAACTACAGGGACTTCAATTGATATGCAGCTCCTTTTTCGAGAGTGGCCAAATGTGCTTTCACTTTTGGCAGGTTTAATTGCTATCAAGACATTGATCATAACCGCGATTGGTCCTCGTGTTGGGCTTAGTTTACAAGAAAGTGTGAGAATAGGATTGCTGTTATCCCAGGGAGGCGAGTTTGGATTTGTAGTTTTCTCTTTGGCAAATAGGCTTGGGGTGCTTCCGCTTGAGCTCAACAAGTTGCTTATAATTGTTGTTGTATTGTCAATGGCATTAACCCCTTTTCTGAATGAAGCTGGAAGAAGGGCTGCTAGTTTTATTGAAGACAAATCTGATACTGAGAAAAAAGCTTCTGAGAAGGTTAACTATGATGCCAGTGAGCCTGTTGTTATCCTTGGATTTGGACAAATGGGGCAGGTCCTTGCCAATTTGCTGTCCAATCCATTGGCTTCAGGAGGAGATAGTGTTTCAGTAGGATGGCCTTATATAGCTTTTGATCTTAACCCCACAGTAGTAAAGGCAGCTAGGCAACTTGGTTTCCCTGTTCTCTACGGGGATGGATCACGCCCAGCCGTTCTTCAATCTGCTGGTATATCTTCTCCTAAAGCTATCATGGTTATGTACACTGGCAAGAAGAAGACACTTGAAGCTGTCCAGAGTCTGAGATTGGCTTTTCCTGCAATTCCAATCTATGCCAGAGCTCAAGATCTCAAGCATCTTTTAGATCTGAAGAAAGCAGGTGCAACAGATGCCATTCTGGAAAATGCAGAGACTAGCTTACAGCTGGGTTCTAAGCTTCTGAAAGGTCTTGGTGTGATGTCTGATGATGTAGCATTTTTGAGTCAGCTAATTAGAGATTCCATGGAGCTCCAAGCTCAGGAATCAATCTCCGTTCGTGACTTAGATATTATGAAACCGCTGCAGGTGAGAGTTGCTGACTTGATGGAGGCACGTGAAGCAACAACTTCACCGGAATATGAATTATCAGAAGTGAACCAGAAAGAGCAAGCTTCAATGAGTAGAATTCAGAAGGAAATAGATCCTGAAGAACAAGATTATGAGCTAAACCAAGCTGTGAATTTACAAGGGAATGGTGTTGCATTTGGGAAACAAGGTGCAGAAGAAAGCTCAATGGTTGGATCTCAAGATGATGTGGTGGACCCTCCAATCCCTTCCCATAATGCCATGGAGGAACCCTGA 2265 0.4322 MAQFVGILPQKICSKAPLSLFHHFLEVKDSTSQSLGHYVGNGLQTNVAYDVAGAVEVINDLGLDTLTFLGVTVFIVPTFKSIKASPILGFFFAGVVLNQFGLIRNLTDVKVLSEWGILFLLFEMGLELSLARLKALAKYAFGMGLAQVVLSTLAFTAFELPPNGAVGTKILEFLFHSRPDLVNIRSVDEAVVIGAALSLSSSAFVLQLLAEKGELPTRFGSATLGILLLQDLAVVPLLVILPILETQNVSEGSVWPMLAQESLKALGGLGLLSLGAKYILRRVFEVVADTRSSEAFVALCLLTVAGTSLVTQHLGFSDTLGAFLAGAILAETNFRTQIEADIRPFRGLLLGLFFLTTGTSIDMQLLFREWPNVLSLLAGLIAIKTLIITAIGPRVGLSLQESVRIGLLLSQGGEFGFVVFSLANRLGVLPLELNKLLIIVVVLSMALTPFLNEAGRRAASFIEDKSDTEKKASEKVNYDASEPVVILGFGQMGQVLANLLSNPLASGGDSVSVGWPYIAFDLNPTVVKAARQLGFPVLYGDGSRPAVLQSAGISSPKAIMVMYTGKKKTLEAVQSLRLAFPAIPIYARAQDLKHLLDLKKAGATDAILENAETSLQLGSKLLKGLGVMSDDVAFLSQLIRDSMELQAQESISVRDLDIMKPLQVRVADLMEAREATTSPEYELSEVNQKEQASMSRIQKEIDPEEQDYELNQAVNLQGNGVAFGKQGAEESSMVGSQDDVVDPPIPSHNAMEEP* 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1613 754 MobiDBLite consensus disorder prediction 680 694 - -
Dod04g1613 754 MobiDBLite consensus disorder prediction 721 754 - -
Dod04g1613 754 Pfam TrkA-N domain 484 607 IPR003148 GO:0006813
Dod04g1613 754 Gene3D - 483 653 - -
Dod04g1613 754 Gene3D - 60 459 IPR038770 -
Dod04g1613 754 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 34 704 - -
Dod04g1613 754 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 484 622 IPR036291 -
Dod04g1613 754 MobiDBLite consensus disorder prediction 675 696 - -
Dod04g1613 754 Pfam Sodium/hydrogen exchanger family 67 452 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Dod04g1613 754 ProSiteProfiles RCK N-terminal domain profile. 483 615 IPR003148 GO:0006813
Dod04g1613 754 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 34 704 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1613 Dod-Chr4 38223724 38232668 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1613 40 711 Inorganic Solute Cotransporters AT4G04850 76.246 0.0 1000
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1613 - - aprc:113858933 1153.27