Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1597 ATGGAATCCTTTGTCCAGTCTAATGAATCGTTTAGGCAAGGTCTTCTTGCTGGATATGTTTTTGCCGCAACTTTTTCCATAGTTTTTTGTATGGCTTATTATGTACCTACACAACTTGGCAAGAAGTGCAAACATGAGAAGGGTGCACGTAAGGAAGCTAGACAGATGCGCAAATTGTCACATCAGGAGTTGAAACAGCAGCGTATCAAAGAGAAACAAAGGAAAGCTACTAGACAGAGAGACAAACTGATGTCTGTGGAGGTGCTAGAGAAAAGAACAGAGATCAATGCAGTTGCACGGTCGATATTTAGAATGAGCTTCACAAACCTATGCAGTGCAACCAACTACTTTAGTGAGAAAAATGCCATTCGGGTGGGAATGACTGGGATAATGTACAAGGCAGCGCTTCCCTACGGTTTCCTAGCAGTTAAAAGACTATACGATTCTCAGTTGTTGACCAAACAGTTCGAGTTAGAAATAATGATTCTGGGGAGATACAATCACAGAAACATAGTTCCCCTGCTTGGTTTCTGCATAGAAGAAGAAAGAAAGGAAAGGATTCTGGTGTATCAATACATGTCGAATGGAAGACTTTCCGATTGGTTTAATGATACCACGAGATTAGGGTGGCCTGTGGTTGTTAGGATTGCACTTGGGGTAGCAAGAGGTTTATCTTTCCTCCACCATAGCTTGCATGTGGCTCATGTAAACATCAGTTCAGATTGTATCTTGCTGGGGAACAATTTTGAGCCCAAAATATCCAGTTTTAGAGGGGCCATATTTGTGAACCATGATCTAGACAAAAGCAGAGGCTTTGAGAAGGATGTCTACGACTTTGGAACTTTGCTTTTTGAGCTGATTAGGGGGAAGAAATTTGACCAATTTGGAGACTATTTCGGCAATGCTGAGGGCGGCCCTTTTAGCACTTATACATATCCTACTAATCTGTTTGAGGAGCCTTGTGGCTTCTATGATGCCATGGATAAGCGTCTAGACGAGAGGGAATTTGATGATGAGGTATCTGCCCTTATGAGAGTTGCTTGTGACTGTGTTCATCCTGTTCCCAATCAAAGGCCAACGATTGTTGAAGTATACAGCGAGATGAGCAATATATGGGAGAGAGGCAGATTCTTTGTGACGAGGAGAGATCAAGGAAGGGAATCATGGTGGTGGGCGAGGATCACAAAAATTGGATTCCGAGCATTATTTGCGCAATTCAGTCTTCCCAGAGGCAAGCAGGGGAGGGAGAGATGGGGTTCAGATCTTCTACCCCAAATTTCCTGTGATTTCTCTGTCCTTTACTCATATGTTTATAAATGTCTTATTATCAAGAAATTTTTTTCAATTTTTTTAAAATTAATTTTTAATAACTACTTATAA 1380 0.4138 MESFVQSNESFRQGLLAGYVFAATFSIVFCMAYYVPTQLGKKCKHEKGARKEARQMRKLSHQELKQQRIKEKQRKATRQRDKLMSVEVLEKRTEINAVARSIFRMSFTNLCSATNYFSEKNAIRVGMTGIMYKAALPYGFLAVKRLYDSQLLTKQFELEIMILGRYNHRNIVPLLGFCIEEERKERILVYQYMSNGRLSDWFNDTTRLGWPVVVRIALGVARGLSFLHHSLHVAHVNISSDCILLGNNFEPKISSFRGAIFVNHDLDKSRGFEKDVYDFGTLLFELIRGKKFDQFGDYFGNAEGGPFSTYTYPTNLFEEPCGFYDAMDKRLDEREFDDEVSALMRVACDCVHPVPNQRPTIVEVYSEMSNIWERGRFFVTRRDQGRESWWWARITKIGFRALFAQFSLPRGKQGRERWGSDLLPQISCDFSVLYSYVYKCLIIKKFFSIFLKLIFNNYL* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1597 459 Pfam Protein tyrosine and serine/threonine kinase 142 256 IPR001245 GO:0004672|GO:0006468
Dod04g1597 459 Gene3D Phosphorylase Kinase; domain 1 77 192 - -
Dod04g1597 459 SUPERFAMILY Protein kinase-like (PK-like) 99 366 IPR011009 -
Dod04g1597 459 Gene3D Transferase(Phosphotransferase) domain 1 270 376 - -
Dod04g1597 459 Gene3D Transferase(Phosphotransferase) domain 1 193 269 - -
Dod04g1597 459 ProSiteProfiles Protein kinase domain profile. 117 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g1597 459 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 7 376 - -
Dod04g1597 459 PANTHER RECEPTOR-LIKE PROTEIN 55 7 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1597 Dod-Chr4 38061250 38065147 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1597 90 384 Receptor kinase-like Gene Family AT1G69990 32.508 5.23e-43 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Dod04g1597 PK_Tyr_Ser-Thr 2.4e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1597 - - gmx:102663800 460.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1597 04 38061250 38065147 Dod03g0281 03 3041001 3046190 PCT