Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1585 ATGCGTGATATGAGCATGCTTCCATTGACTTTGATAATTGGGATTTGCATAGGCTTTGTGGTTGGAGTGGGTTTGGCATTTTCAATTTTGCTGTGCTTCAGGTGTGGAAGGAAGCATGCACAGGAGATGGAGAAGAGCAGTTCTCAAAGAGCAGCAACCATTCCTATCCGCAGCAAAGGGGTTGATTCCAGCACAACATTATCAGACTCCAATGCGGGTCTCGAGTCACCCAGAACATCTGAGTGGAGTAGCATGCCTTTATGGTTGGAGGGACTTAGGAGGAAGAGTGTAGTTTCTGCATGTGGAATTCCCAAGTATTCTTACAAAGATATACAAAAGGCAACCTCTAATTTCACAATCATCATAGGCCATGGAGCATTTGGACCTGTTTACAAAGCACAGATGTCCACAGGTGAGACAGTTGCAGTTAAAGTTCTTGGTACAGATTCAAGTCAAGGGGAAAAGGAATTTTTAACTGAGGTCCTCTTACTTGGAAGATTACATCACAAAAATCTTGTGGGTTTGGTGGGATATGCTGCAGAAAGAGGACAGCATATGCTCCTTTACATTTATATGAGCAATGGCAATCTTGCTTCTCATTTGTATGGCCAAAATCAGGAGCCACTGGGCTGGGATGTGAGACTTACCATAGCGCTGGATGTTGCAAGGGGACTTGAATATCTACATTATGGGGCTGCTCCACCTGTTGTACACCGTGACATCAAATCGTCCAACATCCTGTTGGACCAGTCTATGAGAGCTAAGGTCACAGACTTTGGGCTTTCCAGACCAGAGATGATCAAACCTCACACATCAAATGTCAGAGGAACTTTTGGATATCTTGATCCAGAGTATATGTGTACAAGAACCTTCACTAAGAAAAGTGACGTTTATAGTTTTGGCGTGCTACTGTTTGAGCTTATTACTGGAAGGAATCCACAGCAGGGTCTCATGGAATATGTAAAACTAGCAGCAATGGAAGGAGAGGGTAAGGTTGGATGGGAAGAAATTGTGGATTCACAACTGAATGGAAAATATGATGTGCATAAGCTTAATGATATGGCTTCGCTTGCATTCAAATGTGTCAATGAAGTCTCCAAAAGCCGACCTCGAATGAGGGACATTGTTCAAGCATTATCTCAGCTTTGTAAGAAGCATAGTAGAAATCACAGCAGCACATCTCCTGCTGCATTAAAGGAAGTTTCCATTCAAATGGAACACCTAAAAACCCAGGAATTTCAATCAATTAAGTGTCCAAAGGTGCTGTGCAGATTGCATAGTCGATAA 1287 0.4281 MRDMSMLPLTLIIGICIGFVVGVGLAFSILLCFRCGRKHAQEMEKSSSQRAATIPIRSKGVDSSTTLSDSNAGLESPRTSEWSSMPLWLEGLRRKSVVSACGIPKYSYKDIQKATSNFTIIIGHGAFGPVYKAQMSTGETVAVKVLGTDSSQGEKEFLTEVLLLGRLHHKNLVGLVGYAAERGQHMLLYIYMSNGNLASHLYGQNQEPLGWDVRLTIALDVARGLEYLHYGAAPPVVHRDIKSSNILLDQSMRAKVTDFGLSRPEMIKPHTSNVRGTFGYLDPEYMCTRTFTKKSDVYSFGVLLFELITGRNPQQGLMEYVKLAAMEGEGKVGWEEIVDSQLNGKYDVHKLNDMASLAFKCVNEVSKSRPRMRDIVQALSQLCKKHSRNHSSTSPAALKEVSIQMEHLKTQEFQSIKCPKVLCRLHSR* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1585 428 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 3 413 - -
Dod04g1585 428 ProSiteProfiles Protein kinase domain profile. 116 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g1585 428 SMART serkin_6 116 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g1585 428 MobiDBLite consensus disorder prediction 44 79 - -
Dod04g1585 428 Pfam Protein tyrosine and serine/threonine kinase 121 379 IPR001245 GO:0004672|GO:0006468
Dod04g1585 428 PANTHER OS01G0253100 PROTEIN 3 413 IPR045271 GO:0004714|GO:0006468
Dod04g1585 428 Gene3D Transferase(Phosphotransferase) domain 1 192 406 - -
Dod04g1585 428 Gene3D Phosphorylase Kinase; domain 1 90 191 - -
Dod04g1585 428 SUPERFAMILY Protein kinase-like (PK-like) 103 398 IPR011009 -
Dod04g1585 428 MobiDBLite consensus disorder prediction 46 79 - -
Dod04g1585 428 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Dod04g1585 428 CDD STKc_IRAK 122 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1585 Dod-Chr4 37956557 37960399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1585 102 383 Receptor kinase-like Gene Family AT3G19300 41.463 1.28e-73 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Dod04g1585 PK_Tyr_Ser-Thr 3.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1585 - - gmx:100816549 635.95