Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1575 ATGGGACATGTATATGATGATAGGCTATCAGTGTCTCTAGATGAGTTATGTTTCAATGCTGAAAATGGTAGCAACAGAGGGAAGATGGGCAGAAAGAACTATGATGATGACACAGTAGTGTTCAAGTCCAAGAACCTTGAGACAGAAAGGAAAAGGAGGGAGAAGCTCAGTAGCAGGCTTTTGATGCTGCGGTCCTTACAACGATTATTGACTGATGCTATCACTTACATCAAGAGCCTGCAGGACAAAGTTCAGAGCCTCAGCCAAGAGCTTCATGAAATGGAAGCAACATCAGAGAAAATAGTGAAGCCAAGGAAAGATGAAATTGACACTGCAGAAGAGATGAAAGAATGGGGGATAAAGGAAGAGCTCAGTGTGACGCAAATTGATGGGAATAAACTTTGGGTCAAGATGGTCATAGAGAAGAAGAGGGGAAGATTCATGAAACTGATGGAGGCCATGAGTTCTTTTGGCATTGAGCTCATAGACACCAGTGTTACAACCATGAAAGGAGCATATCTTATTACAACCTCCATGCAGGGCATGGATGGTGAAGCACTAGCAGCTCAGAAAACCAAAGAGTTGTTGCTAGATATCATCGGTGCCACATAG 612 0.4314 MGHVYDDRLSVSLDELCFNAENGSNRGKMGRKNYDDDTVVFKSKNLETERKRREKLSSRLLMLRSLQRLLTDAITYIKSLQDKVQSLSQELHEMEATSEKIVKPRKDEIDTAEEMKEWGIKEELSVTQIDGNKLWVKMVIEKKRGRFMKLMEAMSSFGIELIDTSVTTMKGAYLITTSMQGMDGEALAAQKTKELLLDIIGAT* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1575 203 Coils Coil 77 97 - -
Dod04g1575 203 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 10 201 - -
Dod04g1575 203 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 42 96 IPR036638 GO:0046983
Dod04g1575 203 PANTHER TRANSCRIPTION FACTOR DYT1 10 201 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1575 24 200 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G21330 39.691 7.99e-38 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1575 - - gmx:100793637 201.445