Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1573 ATGGCTGAGGATCTTCAAGCCGGGATTTGTGGTGAAAACTGGTGGAGTATTGATTCAACAAGAAGTGTTTACCCTCTAAACTCATCATCATCATCATCTTCACCTTGCTCCGTGGCAGCCAACAACGATGCGGGAAGCTGTACCACTTGGCAAACCGATTTCATGGATTTGAAGGCATCAAGGTCTTGTGGTGTTGAGACTAATAATTTGGTTTCTGATGATAGTTACCAGCTTGGTTTCCCTGATGCACAGAAGCTACACAAGAATGAACCAGCTGACAGCGCAAGTGGCAGCATCTTGATCGATTCCACCTTGCAAATGATGGGTTATGGCCTCTCTTCTTCAACTTCAGCCAATTGGGATCACTCTCTATTTCGTTGTAGTGAAAGGCCAGAGAGCAATTTCCAATCCGTGCTTCAAGAAGAAACGGGCATAGGTTCTTCTAATTCACAAATCCAAAAGAGTTGGACACCAAAGAGCTTCTCATCGGGTTGCGGAAGCCAAGTTCCTACCATTGACATTTTCAAGCCAATGAACCAAGAATTTTCCTCAGATCAGCAGAGCCTGAGCTCTATAGCCAGCACAAGGTCATCTAGTGGTTTACTAACTGGATCAGGCTCATATGGTTGCCCTCCAACGCTGATACAAAGCTTATATGAACCTGATCCTCAACCACAACCACAGCACTCACTTTTCACCAACCGTTCCATGTCCTATTCATCTACAGCAAACTATGTGGCATCCTCCAATGAACTCTCGCCAATATGGTCTAAAGTCTTTTCTTCCTTTTTGAAGCCTTCATCATCATCATCGTCATCATCCTCCTCCTCCTCAATGGCAAAGCAGCAGCCTATTGGACTTCACTTTTCTAACAACACTCCTTTCTGGAATGCTTCTGCCGAGGCACTTAACGACATGAGAGCAGGTGCTTTTGCTTCATCACCATCCCAATATAAAACACCAACTTTCGAAGAGAAACCCAAATATTGCCCCGGTGTTCTACTAAACAAGCTTAAGAGTGAAGAATCTCTGAACACGGCAAAGAAAAATGTTTGTGAACCTGCATTCAAAAGGCCAAGAATTGAAACTCCATCGCCTTTACCAACTTTTAAGGTTCGGAAAGAGAAGCTAGGGGACCGGGTCACTGCTCTTCAGCAACTGGTTTCACCTTTCGGAAAGACCGACACAGCATCCGTTCTTCACGAAGCCATTGAGTACATCAAGTTCCTTCACGATCAAGTCAGTGTGTTGAGTACTCCATATATGAAAAGTGGAGCTCCCATTCAACGCCAGCAGGGCTGTGATGATACGGAAGAGTCAGAAAAGCCAAAAGAAGATTTGAGAAGCCGAGGGCTGTGTTTGGTACCAATTTCAAGCACATTCCCGGTGGCTACTGAGACCACTGCTGATTTCTGGACTCCTTCATTGTCATTCGGAGGCGCGCTCCTAAGATAG 1455 0.4529 MAEDLQAGICGENWWSIDSTRSVYPLNSSSSSSSPCSVAANNDAGSCTTWQTDFMDLKASRSCGVETNNLVSDDSYQLGFPDAQKLHKNEPADSASGSILIDSTLQMMGYGLSSSTSANWDHSLFRCSERPESNFQSVLQEETGIGSSNSQIQKSWTPKSFSSGCGSQVPTIDIFKPMNQEFSSDQQSLSSIASTRSSSGLLTGSGSYGCPPTLIQSLYEPDPQPQPQHSLFTNRSMSYSSTANYVASSNELSPIWSKVFSSFLKPSSSSSSSSSSSSMAKQQPIGLHFSNNTPFWNASAEALNDMRAGAFASSPSQYKTPTFEEKPKYCPGVLLNKLKSEESLNTAKKNVCEPAFKRPRIETPSPLPTFKVRKEKLGDRVTALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVSVLSTPYMKSGAPIQRQQGCDDTEESEKPKEDLRSRGLCLVPISSTFPVATETTADFWTPSLSFGGALLR* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1573 484 MobiDBLite consensus disorder prediction 426 447 - -
Dod04g1573 484 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 371 425 IPR036638 GO:0046983
Dod04g1573 484 Gene3D - 371 431 IPR036638 GO:0046983
Dod04g1573 484 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 361 410 IPR011598 GO:0046983
Dod04g1573 484 MobiDBLite consensus disorder prediction 146 165 - -
Dod04g1573 484 PANTHER TRANSCRIPTION FACTOR BHLH123 39 471 - -
Dod04g1573 484 CDD bHLH_AtbHLH_like 367 418 IPR045239 -
Dod04g1573 484 MobiDBLite consensus disorder prediction 213 232 - -
Dod04g1573 484 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 39 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1573 Dod-Chr4 37741034 37744545 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1573 1 484 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 38.370 1.88e-67 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1573 - - gmx:100784084 538.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1573 04 37741034 37744545 Dod03g0305 03 3535919 3538788 PCT