Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1569 ATGGAGTTTGATCTTGAAGACCCCCTAGCAAGCTTCAAAGAAAATCGAGCTTGTACTATATCAGAACTGTTTGCCTCCGAATCTGATCACATGCCATCACCAAACTGCTTAAGCTCAACGGATTTTCACATTTCTTTTCGTTGTGAAGCTATTTCACTCATATCACAGGTCCAGTTTTCATGCAATTTGGACCCTTATGTAGCTTACCTTGCCATTAATTACTTGGACCGCTTCATGTCAAAGCAAGAAATCCGGCAGGGGAAGCCGTGGTTACTGGGGCTCATTGTCATGGCCTGTCTTTCTCTCGCTTCAAAGATGAAGAACGCACCCTTTTCACTTTCTGAATTTCAGAAACAAGTTTGCATATTTGAGGCTCGGAGTATTCAGAGAATGGAGCTTCTTATTCTTGGTGCTCTGCAATGGCGCATGAGGTCAGTTACACCATTTCCATTCCTGCATTTCTTCATCTCCGTGTATGAACTCAAAGACCAATCACTGAAACGAGCACTTAAAGAAAGAGCTTCAGAGATAATCTTCAGTGCTCATAATGATATCAAGTTTTCAGAGTTCAAACCTTCAACTATTGCGGCATCTGCACTTATCTCTGCATCTCATGAGCTATTGCCACTGCAATATTCTATTCTGAGGGCTTCAGTTACTGCTTGTGAGTATCTAGATGAGGAGATGTTGTCCAAGTGCTTCAATTTCATGCAGGATATGGTGAGGAGAGAGTCAACCAGGGAGACAAGCCTTCTGAGTACAGAAACTCCAGTCAGTGTGCTGGAGAGAAGCATCAAAATACAGAGAATTTGA 813 0.4256 MEFDLEDPLASFKENRACTISELFASESDHMPSPNCLSSTDFHISFRCEAISLISQVQFSCNLDPYVAYLAINYLDRFMSKQEIRQGKPWLLGLIVMACLSLASKMKNAPFSLSEFQKQVCIFEARSIQRMELLILGALQWRMRSVTPFPFLHFFISVYELKDQSLKRALKERASEIIFSAHNDIKFSEFKPSTIAASALISASHELLPLQYSILRASVTACEYLDEEMLSKCFNFMQDMVRRESTRETSLLSTETPVSVLERSIKIQRI* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1569 270 Pfam Cyclin, C-terminal domain 146 248 IPR004367 -
Dod04g1569 270 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 5 264 - -
Dod04g1569 270 Gene3D - 22 234 - -
Dod04g1569 270 SUPERFAMILY Cyclin-like 20 143 IPR036915 -
Dod04g1569 270 PIRSF Cyclin_A_B_D_E 23 254 IPR039361 -
Dod04g1569 270 PANTHER CYCLINS 5 264 IPR039361 -
Dod04g1569 270 SMART Cyclin_C_2 146 270 IPR004367 -
Dod04g1569 270 Gene3D - 33 144 - -
Dod04g1569 270 SUPERFAMILY Cyclin-like 128 242 IPR036915 -
Dod04g1569 270 CDD CYCLIN 47 136 IPR013763 -
Dod04g1569 270 Pfam Cyclin, N-terminal domain 22 143 IPR006671 -
Dod04g1569 270 SMART cyclin_7 52 137 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1569 Dod-Chr4 37647058 37648430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1569 1 263 Core Cell Cycle Gene Families AT4G03270 42.652 5.34e-62 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1569 K18812 - gmx:100799985 370.163