Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1566 ATGACGTCACAGCCACACCTCCACCCCTCCGAGTTGGACACGGACTCGGTGGCCTCGTCGCCTCGCTCCGACCACTTCCACGAGGCGGCGCCACGTGTGCGCTTCATGTGCAGCTTCGGCGGCAAGATCCTCCCCCGCCCCCACGACAACCAGCTCCGCTACGTCGGCGGCGACACCCGCATCGTCGCCGTCCACCGCTCCATCTCCTTCCCCGCCCTCCTCCTCAAGCTTTCCAAGCTCTCCGGCAAGAGCAACATAACGGCCAAGTACCAGCTTCCCAACGAGGACCTGGACGCGCTGATCTCGGTGACGACAGACGAAGACGTGGAGAACATGATGGACGAGTACGACCGCACCGCACACAATCAAAACCCGCGATCGGCTCGGCTCCGCCTCTTCCTCTTCCCAGAAGGCGAGGACTACTCCTACCGAGCCGACAGCATCGGCTCGCTCCTCAACGGCTCGGCTAACCGCGAGACCTGGTTCCTCGACGCCCTAAACGGCGGCGTTTCGGGTGCCCTCGAGCGTGGCCGCTCCGAAGCCTCCTCGATGCTCTCCGAGGTACCCGATTACCTCTTCGGGCTCGACAACTCCGAAGAAGCCCAACCCACTCAGCACCGCGAACCAAGGCCCAGGGATCGGCCCGCTCTCCATTCGGATCCGGGTTCTCCGGCCCCGGTTGTCTCCTCGCCATTTTGCTCCACGTCATCTGCGCCGTGTGTGCCATCTATTCCCAACCTTCCCCCGGTTAAAACCAAGCCCGCGAACCCAGTTCCTGACGTGGAGTCCAAGGAGAATCAAGTTGAGCCTGAAACGGTTGGGCGACAGCAACCCAACCCGAATCCGTACCCAGGTGACCCTAGAGTGCACTACGGCGCCCCGGATGCTGCTTATTCGGGTCATTCTGTTCAACCCGTTCCTGTATACTATTACTCGGGTCCGGTTCAACCCGGAACCGTGCCCGTTCATTTACAGGCTCCATATTCGTATGTTCAACAACCGTATCATGCAGTGGTTCCGGGTCAGGTTCCAATTGGGTACCATCATTTGGTTCCGGGTTCGGGTCAAGTTTACGGAGCGGGGATCAGGCATGTGAGCCCCGTGCTTCCTTACAGTCCCTCTGCGGAGGTTCACGATGGTGTGAAACAGGAGGTGTATCATGCGTTGCCGGGTTCCGGCGCGGGTGGCAGTGGCGATGTCGGGTGGGGATGA 1212 0.6106 MTSQPHLHPSELDTDSVASSPRSDHFHEAAPRVRFMCSFGGKILPRPHDNQLRYVGGDTRIVAVHRSISFPALLLKLSKLSGKSNITAKYQLPNEDLDALISVTTDEDVENMMDEYDRTAHNQNPRSARLRLFLFPEGEDYSYRADSIGSLLNGSANRETWFLDALNGGVSGALERGRSEASSMLSEVPDYLFGLDNSEEAQPTQHREPRPRDRPALHSDPGSPAPVVSSPFCSTSSAPCVPSIPNLPPVKTKPANPVPDVESKENQVEPETVGRQQPNPNPYPGDPRVHYGAPDAAYSGHSVQPVPVYYYSGPVQPGTVPVHLQAPYSYVQQPYHAVVPGQVPIGYHHLVPGSGQVYGAGIRHVSPVLPYSPSAEVHDGVKQEVYHALPGSGAGGSGDVGWG* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1566 403 MobiDBLite consensus disorder prediction 1 24 - -
Dod04g1566 403 SUPERFAMILY CAD & PB1 domains 48 142 - -
Dod04g1566 403 Pfam PB1 domain 48 136 IPR000270 GO:0005515
Dod04g1566 403 MobiDBLite consensus disorder prediction 201 217 - -
Dod04g1566 403 MobiDBLite consensus disorder prediction 200 283 - -
Dod04g1566 403 PANTHER OS05G0427100 PROTEIN-RELATED 7 393 - -
Dod04g1566 403 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P 7 393 - -
Dod04g1566 403 MobiDBLite consensus disorder prediction 1 17 - -
Dod04g1566 403 SMART PB1_new 47 137 IPR000270 GO:0005515
Dod04g1566 403 Gene3D - 53 136 - -
Dod04g1566 403 CDD PB1_UP2 36 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1566 Dod-Chr4 37628695 37630358 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1566 22 170 MAP Kinase Kinase Kinase AT3G46920 42.667 7.35e-31 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1566 - - aprc:113858359 611.298