Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1558 ATGGGTGATGAAGAAGACTTCGCCGGAGAACCCAACCCCTTTAAGAACTCGCCCGAGCCACCGGCAGGAGAATCCCCCCTCCAGCGAGCCGTGGAGGTGATCGCCGCCGTGCTCTCCCTCTCCCACTCGATCAGGTCATTCGCCGCAAAGTGGAAACTAATCCGCAGCAAGCTCGAGGAGCTCCACTCCGCCCTGATCGCCGCCGACAACTGCGATTCCGGCAAGAATCCCTCCCTCTGTGGTCTCCTCCCCGCGGTGATTTCCACCGCCGGAGAGTGCCGCGACCTCGCACGCCGCTGCTCCGACCTCTCCTACAGCGGTAAGCTCCTTATGCAGAGCGATTTGGACGTCGCCATCGCCAGACTCGACGGCCACGTCAGCACCCTCTCCGAGATTTACAAGAGGGGCATTCTCACAAATGGGTACGCGCTCGTCGTCTCAAAACCGAGTCTTGGTGCCTCCAGAGATGACGTGAGATTCTACGTCCGGGACTTGTTAACGAGGATGAAGATTGGTGATTTGGGTATGAAGAAACTGGCACTGAGGAATATGTACGAGGTTGTTGCGGAGGATGAGAGGTACGTGAAGGCCGTTGTGGATGTTGATGACGTGGTTCACGTGCTGGTGGGGTTTCTTTCTTCGAATGAATTGGAAATCGTAGAGGAGAGTGCTAAGGTTGTTTATGTTATTGCGGGTTTTGATTGTTATAAAGGGGTTTTGGTTAATGCTGGTGTTGTTGCGCCTTTGGTTCGTGTCTTGGATTGTGGGAGCGAGGAAGGGAAGGTTGGGGCGGCGAGGTGTTTGGTGAAGCTCACTGAGAATTCGGACAATGCTTGGTGTGTCTCTGCTCACGGTGGCGTCACTGCCTTGTTGAGGATTTGCGGCGATGAAGGTTGCAAAGTGGATTTGGTTGGTCCTGCTTGTGGGGTCTTGAGGAACCTCGTTGGCGTCGAAGAGATTAAGAGGTTTATGGTCGAGGAAGGTGCTGTTTCCACCTTCATCAGCCTTGTGTGGTCCAAGGAGGAAGCCATTCAGGTCAACTCCATAGGGTTCATTCAGAACATTGCCTATGGGGACGAGGTTGTTAGGCAGATTGTGGTTAGGGAAGGTGGGATCCGTGCCTTGTTGCGTGTTTTGGATCCTAAGTGGTCTTATTCATCAAAAACCAGGGAAGTCGCAATGAGGGCCGTTGAGAATTTGTGTTTTTGTTCGGCTAGTTCAGTGAGTGTTTTGATCAGTTACGGTTTTGTGGATCAGCTGCTATATTATGTTCGGAATGGGGAGGTCTCGGTTCAAGAGGTGGCGCTGAAAGTGGCGTTTAGGTTGTGTTTAGCATCCGAGGATGCTAAGAAAGCAATGGGGGATGCGGGTTTTATGGCTGAGCTTGTCAAATTCCTAAACGCCAAGTCATTTGAGGTTCGCGAAATGGCTGCCGAGGCGCTCTCTGCCATGGTTGTGGTGCCTAAGAATAGGAAGAGATTTGTGCAGGATGACCATAACATTGCCCTTCTTCTTCAATTGCTTGACCCGGAAGAGGGAAATTCAGGTAACAAAAAGTTGTTAATCTCTATCTTGATGTCATTAACGAGTTGCAATAGTGGGAGGAAAAAGATTGCTAGTTCTTGTTATGCCAAAAACATAGAGAAACTTGCAGAGGCTGAAGTTTCCTCTGATGCCAAAAGGCTTGTGAAGAAGCTATCCACAAACCGGTTCCGCAGTATGTTGAGTGGAATCTGGCACTCATGA 1746 0.5103 MGDEEDFAGEPNPFKNSPEPPAGESPLQRAVEVIAAVLSLSHSIRSFAAKWKLIRSKLEELHSALIAADNCDSGKNPSLCGLLPAVISTAGECRDLARRCSDLSYSGKLLMQSDLDVAIARLDGHVSTLSEIYKRGILTNGYALVVSKPSLGASRDDVRFYVRDLLTRMKIGDLGMKKLALRNMYEVVAEDERYVKAVVDVDDVVHVLVGFLSSNELEIVEESAKVVYVIAGFDCYKGVLVNAGVVAPLVRVLDCGSEEGKVGAARCLVKLTENSDNAWCVSAHGGVTALLRICGDEGCKVDLVGPACGVLRNLVGVEEIKRFMVEEGAVSTFISLVWSKEEAIQVNSIGFIQNIAYGDEVVRQIVVREGGIRALLRVLDPKWSYSSKTREVAMRAVENLCFCSASSVSVLISYGFVDQLLYYVRNGEVSVQEVALKVAFRLCLASEDAKKAMGDAGFMAELVKFLNAKSFEVREMAAEALSAMVVVPKNRKRFVQDDHNIALLLQLLDPEEGNSGNKKLLISILMSLTSCNSGRKKIASSCYAKNIEKLAEAEVSSDAKRLVKKLSTNRFRSMLSGIWHS* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1558 581 MobiDBLite consensus disorder prediction 1 26 - -
Dod04g1558 581 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 11 581 - -
Dod04g1558 581 SMART arm_5 358 402 IPR000225 GO:0005515
Dod04g1558 581 SMART arm_5 274 316 IPR000225 GO:0005515
Dod04g1558 581 SMART arm_5 446 486 IPR000225 GO:0005515
Dod04g1558 581 SMART arm_5 233 273 IPR000225 GO:0005515
Dod04g1558 581 SMART arm_5 317 357 IPR000225 GO:0005515
Dod04g1558 581 SMART arm_5 191 232 IPR000225 GO:0005515
Dod04g1558 581 Gene3D - 161 570 IPR011989 -
Dod04g1558 581 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 11 581 - -
Dod04g1558 581 SUPERFAMILY ARM repeat 148 531 IPR016024 -
Dod04g1558 581 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 285 329 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1558 Dod-Chr4 37513874 37515664 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1558 145 435 U-box Gene Family AT2G23140 25.085 1.36e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1558 - - adu:107480628 909.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1558 04 37513874 37515664 Dod03g0329 03 3938259 3940169 PCT