Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1548 ATGACAACAACAGCCATGGTTGAAGAGGAAGCAGTGCCGCAGCCAGGACCCAAAGTTCGCCACCTTAATAAGAGAGCTTTAAAGAACAAAGCTGTGGCAGTCACTTTCAACGAGAAAGATCTGATGGACTATGTGACTGGGTTTCACAAGCGCAAGAAGAAGAGGAGAAAGGAAGCGCAGAGGCAACAAGAGGAGGTTCTAAGATGGAAACGCCTTGAGGAGCGCAAAAAGAGGAAGTTGGAAAGAGAACTTGTTCTTTATGGTGGCACACGACCAACTGGTGATGCAGAACCTGATGAAATTGATGAGCAACAAGACGATGATACAGAGCAAGTTGAATCTATTGCTGATACAAAGACATACGAAGATGGCGATATGAAAGTCACGGTGGTAACAAGTGAGATCAACCCCGAAGAAGAAAGTTACGTCGGTGAAAGGAAGGAGGCAGCAATGTCCCATCCTGTTGTAGCTGATACAAGGCACAAGATACCTTTAAATAAGAAGAAACCGTTTAAAAGCGTTGCAAAACACAAGTCACGTCCAAAGCCAAGAACAACCAAACAGGCTCGGTTTCGGTTCGGAATTGGAACAATGCACGCGAGAAGTGTGGAGAGATCGAGTGGTGCGCCGAGGGAGAAGCGATGTTTGGATTCTTCTACTTCCGGTGAAGAAGGACAGCCTGATCGGAAGCGACCTGCTTTGGCTAGTGTACTTGTTGAAGCCCTGAAGGTGGACACCATGCAGAAACTTTGCTCTTCATTGGAACCTATTCTACGCAGAGTTATTCTCGGGAGTGGCATGTCAAATAAGATGTGGGATATTCTTGTTGAGCATGCAAAGACTTGTGTTCTCAGTGGAAATCATTATGTATACTATCCTGATGATGCAAGAAACGTGGGTGTTGTTTTCAATAACATTTATGAGCTAAGTGGCTTAATTGCCAATGACCAATATTACTCAGCTGATTCTCTCTCTGAGAATCAAAAGGTTCTTGTAGATACATTGGTGAAGAAGGCATATGATAATTGGATGCATGTTATTGAATATGATGGGAAGTCCCTACTAAATGACAATCAGAATAAGACTTTGGACCCCTCTCATCATCAGGCTCGAATGGGCTCGCATGAATATTCAAACTCATTTCAGCAGATTTCAATCCCAAATTTGCCAGTTCCAGTACATACAGGGCAGCCTTCAGTGGATTCAGGGGTAACAACTGGAGGTTATCATGATGGCACAGCTAACAGATTCCCCGTGCAACCACAAAATATTAATATTAATTCTTGTATTCAGTTTGATAATAATGCATGCCCACTACAAAACCAGTTGATCAATTCTTCACACCAAGCTCAACTTCCCAGAAATGACAATATGCTGGCAGTGGCACTTGGTCAGTCACAATCAGCTACTCATGGCTTCCAGACTGCCAGCATTTCAAATCCTGCTTATCAAGGAGTTGAAGAATTCTTCCCAGAGGAAGAGATTCGTATTAGAAGTCATGAGATGCTGGAAAATGAAGATATGCAGCATCTGCTTCGTAGTTTTAATATGGGAGGCCAAGGTCATGGTTCCTATGATGCTCATGAAGATGGGTATACATCTGCATACATGACTGCAGCTCCCATGAGCTACAATTTTGACGATGAGCGAAGCCGTTCCTCAGGTAAAGCTGTTGTGGGCTGGCTCAAACTTAAGGCAGCTTTGAGATGGGGCATTTTCACTAGGCAGAAGGCAGCTGAGAGACGGGCACAACTTGTTGAGTTGGATGACTCAGAATATGATATTGGAGGCACATCTCATCGGTAA 1806 0.4396 MTTTAMVEEEAVPQPGPKVRHLNKRALKNKAVAVTFNEKDLMDYVTGFHKRKKKRRKEAQRQQEEVLRWKRLEERKKRKLERELVLYGGTRPTGDAEPDEIDEQQDDDTEQVESIADTKTYEDGDMKVTVVTSEINPEEESYVGERKEAAMSHPVVADTRHKIPLNKKKPFKSVAKHKSRPKPRTTKQARFRFGIGTMHARSVERSSGAPREKRCLDSSTSGEEGQPDRKRPALASVLVEALKVDTMQKLCSSLEPILRRVILGSGMSNKMWDILVEHAKTCVLSGNHYVYYPDDARNVGVVFNNIYELSGLIANDQYYSADSLSENQKVLVDTLVKKAYDNWMHVIEYDGKSLLNDNQNKTLDPSHHQARMGSHEYSNSFQQISIPNLPVPVHTGQPSVDSGVTTGGYHDGTANRFPVQPQNININSCIQFDNNACPLQNQLINSSHQAQLPRNDNMLAVALGQSQSATHGFQTASISNPAYQGVEEFFPEEEIRIRSHEMLENEDMQHLLRSFNMGGQGHGSYDAHEDGYTSAYMTAAPMSYNFDDERSRSSGKAVVGWLKLKAALRWGIFTRQKAAERRAQLVELDDSEYDIGGTSHR* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1548 601 PANTHER CALMODULIN-BINDING PROTEIN 260 589 - -
Dod04g1548 601 PANTHER CALMODULIN-BINDING PROTEIN 198 262 - -
Dod04g1548 601 Pfam Calmodulin binding protein C-terminal domain 288 349 IPR046829 -
Dod04g1548 601 MobiDBLite consensus disorder prediction 199 231 - -
Dod04g1548 601 Pfam Calmodulin binding protein central domain 260 282 IPR046830 -
Dod04g1548 601 PANTHER OS02G0177800 PROTEIN 260 589 IPR012416 GO:0005516
Dod04g1548 601 PANTHER OS02G0177800 PROTEIN 198 262 IPR012416 GO:0005516
Dod04g1548 601 Pfam Nucleolar protein 12 (25kDa) 24 147 IPR019186 -
Dod04g1548 601 MobiDBLite consensus disorder prediction 85 112 - -
Dod04g1548 601 MobiDBLite consensus disorder prediction 205 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1548 Dod-Chr4 37349069 37361666 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1548 260 586 Calmodulin-binding Proteins AT5G57580 51.862 4.46e-100 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1548 - - gmx:100812605 523.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1548 04 37349069 37361666 Dod03g0336 03 4060142 4065335 PCT