Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1528 ATGGGAGCGGAGGTGATGGTAACGTGGGGAACCTGGGAGGAGCTCCTCCTCGGTGGAGCTGTTCTCAGGCACGGCACCCGAGACTGGTCCGTCGTCGCCGCCGAGCTCCGAGCTCGAACCCTCTCTCCATGCACCTTCACACCCGAGGTCTGTAAAGCCAAATATGAAGACTTGCAACAGCGCTATTCTGCGACTTGGTTTGAGGAGATTAAGAAGAAAAGAGTAGAGGAGCTTAAGAGGGCTTTGGAGCTATCTGAAGATTCTATTGGGTGTCTCGAATCAAAGCTCGAATCCCTTAAGGCTGCGAAGAATGAGAAAAGAGATGATTGCCCTGCTGACAATGGTTCAGCTGGACCAGACTTACAGGTTCCTCCACTGAAATTGGAGAGAGTTGAATCTTCCCCTAAAGAGACGTCAAAGGATGGGCTATCTGCTGGGAGTTTCACACACGAAACTCGGGCACACTGGTCTCCTGAATGCCAGGTTCCAGCAGTTTCTCCTGAAGATCAAGTTGTAGAGACTAAGCCTGAAGTTTCAAGATCTGCTGAACAGGATAAAGTTTTGGATGCAGATAAGTTGGAACTTACTATAGATGAAGGAAAAGGAGTAAGTTTTAAAAAAAGAAGAGGGATGAGGAAGAGGAAGGATTGTGCCAGAAATACAAGCGAGACAAGTGTTCGAGAAAGTGACATTTTGGTTTCAGTTGATGTGTCACAGTGTAAAGAAAGTTCTACCAGCAACTGTGATGAGGTTGCCAAATCTTCTGGCATACATGAGGAAAACACAGACTTGAAAAAGGACGGAACAAAAGACTTGACGGAGGTTTTAGATTCTATTTTGGAAACTAAAGGTGCTTCTGCCTTCCGTCGCAGGCATGATAGCCAGAAGCGAGGAAAGTACAAGAAAATGATCCGGCAGCACATGGATTTTGACACTATAAGGTCCAGAATTAGCAGCCAAACAATTAGGTCAGCTATGGAACTTTTCAGGGACTTGCTGCTACTCACCAACAATGCCCTAGTCTTCTACTCCAAGTGCACTCGTGAATATAAAACTGCCCTACTTCTTAGAGACGTTGTCACCAAAAAGTTGAGGGAGAGTTCAAATAGTTTTAGCAGCAGTGCCACCCATGCCAATGTCTCAACCACATTACCTGTGGATGATCCTCCTGTGAAAGTCAGAAGGGTAAGCCCTGGTGACCGCAAGATTGTTGCAAAAGCAGCAGACGGTGGCAGCAGCGGCAGCGATGGAACCAAGAAACTCATTGACCGCAAGATTGGTACAAAGGCGGCAGATGGTGGCAGCGATGGAACCAGGAGACCCATTGACCGCAAGATTGCTACAAAGGCAGGTGTTGCAAAGGCAGCAGATGGTGGCAGCGATGAAACAAAGAAACCCATTGACCACAAAATTGTTGCAAAGGCAGCAGACGGTGGCATCGATGGAACCAAGAAACCCATTGACCGCAAGATTGTTGCAAAGGCAGCAGACAGTGGCAGCAATGGAACCAAGAAACCCAATGACGTGGATGGGGCCAAGAAACCCAGTGAAGTGGATTCCCCACCTTCAGTTGAATCCTTGCCCATCAAGAAAGCTTTCGGCAGACCAAGAAAGGCTGGACGTGGAGCCGCAAGTGCGAGACCTGCAACGCCAGTGAAGGGGAAGAAGAGAGGGAGAGCAAAGTGGTAA 1689 0.4825 MGAEVMVTWGTWEELLLGGAVLRHGTRDWSVVAAELRARTLSPCTFTPEVCKAKYEDLQQRYSATWFEEIKKKRVEELKRALELSEDSIGCLESKLESLKAAKNEKRDDCPADNGSAGPDLQVPPLKLERVESSPKETSKDGLSAGSFTHETRAHWSPECQVPAVSPEDQVVETKPEVSRSAEQDKVLDADKLELTIDEGKGVSFKKRRGMRKRKDCARNTSETSVRESDILVSVDVSQCKESSTSNCDEVAKSSGIHEENTDLKKDGTKDLTEVLDSILETKGASAFRRRHDSQKRGKYKKMIRQHMDFDTIRSRISSQTIRSAMELFRDLLLLTNNALVFYSKCTREYKTALLLRDVVTKKLRESSNSFSSSATHANVSTTLPVDDPPVKVRRVSPGDRKIVAKAADGGSSGSDGTKKLIDRKIGTKAADGGSDGTRRPIDRKIATKAGVAKAADGGSDETKKPIDHKIVAKAADGGIDGTKKPIDRKIVAKAADSGSNGTKKPNDVDGAKKPSEVDSPPSVESLPIKKAFGRPRKAGRGAASARPATPVKGKKRGRAKW* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1528 562 MobiDBLite consensus disorder prediction 368 383 - -
Dod04g1528 562 Gene3D - 259 375 IPR036427 GO:0005515
Dod04g1528 562 Coils Coil 75 109 - -
Dod04g1528 562 MobiDBLite consensus disorder prediction 418 447 - -
Dod04g1528 562 ProSiteProfiles Bromodomain profile. 280 350 IPR001487 GO:0005515
Dod04g1528 562 PANTHER BROMODOMAIN-CONTAINING PROTEIN 8 464 561 - -
Dod04g1528 562 SUPERFAMILY Bromodomain 265 367 IPR036427 GO:0005515
Dod04g1528 562 MobiDBLite consensus disorder prediction 104 126 - -
Dod04g1528 562 PANTHER BROMODOMAIN-CONTAINING PROTEIN 8 1 424 - -
Dod04g1528 562 PANTHER BROMODOMAIN PROTEIN 1 424 - -
Dod04g1528 562 CDD SANT 8 55 IPR001005 -
Dod04g1528 562 PANTHER BROMODOMAIN PROTEIN 464 561 - -
Dod04g1528 562 Pfam Bromodomain 274 353 IPR001487 GO:0005515
Dod04g1528 562 CDD Bromodomain 269 364 - -
Dod04g1528 562 SMART bromo_6 265 369 IPR001487 GO:0005515
Dod04g1528 562 MobiDBLite consensus disorder prediction 493 562 - -
Dod04g1528 562 MobiDBLite consensus disorder prediction 368 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1528 Dod-Chr4 37130190 37135204 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dod04g1528 Bromodomain 1.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1528 - - gmx:100804245 541.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1528 04 37130190 37135204 Dod03g0364 03 4273257 4278376 PCT