Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1518 ATGGATAATGTTACATTAAAGCTGACAAGTCTATACACCTTCGCTATTTTACTTTTTCTCTCTTCTAGGCCTGCTGTTTCCACCTCCAGACATAGGCCATATTGGAGGGAACTGAGTTCTGTGGGGGATAATAATGGTGATGATCTTGTGACTAACTTGCCTGGCCAGCCTCCTGTAGATTTCCGGCACTATGCTGGTTATGTCACGGTCAATGAAACCAATGGAAGAGCACTCTTTTACTGGTTCTATGAGGCTATGACCAAACCAGAAGAGAAGCCATTGGTGCTGTGGCTTAATGGAGGTCCTGGGTGCTCTTCTGTGGGATATGGAGCAACACAGGAGATTGGCCCATTTTTAGTTGGCACTGATGGCCATGGCCTCAAATTGAATAACTTCTCATGGAACAAAGAAGCCAACATGTTATTCCTCGAATCTCCTGCTGGAGTTGGCTTTTCCTACTCAAACAAAACCAGTGACTATGAACAATTGGGAGATGACTTAACAGCTAATGATGCTTACACTTTTCTGCACAATTGGTTCCTCAAGTTTCCATCATATAGAACAAGGACATTTTACATAGCAGGGGAGAGTTATGCAGGAAAGTATGTACCGGAGCTGGCTGAACTCATCCATGACAGGAACAAGGACCCGTACCTTCATATTGATCTCAAGGGTATTTTGCTGGGTAACCCTGAAACATCTGATCCTGAGGATTGGATGGGACTAGTTGATTATGCTTGGAGCCATGCTATTATATCTGATGAAACTCACAAAACAATCAAAACAAGTTGTGAGTTTAACAGCAGTGATCCGTGGCGTAATGAAGATTGTAGTGATGCAGTAGATGAGGTACTCAAACAGTACCACGAAATTGATATCTACAGCCTCTACACCTCCACCTGCTTTGCTTCTACCGCGCGTAGTTCAAACGGACAATCAATGAAAACTTCTACGAAGCGCTCATCTACAATGATGCCAAGGATGATGGGTGGTTATGACCCATGTTTGGATGACTATGCTAAAGCTTTTTATAATAGACCAGATGTTCAAAAGGCCCTCCATGCCGGTGATGGTCACAATCTAAAGAACTGGAGTATTTGCAACAACGATATGTTCAACGGCTGGGCGGATTCAAAGCCATCTGTTATCCCAATTTACAGGAAGCTTATTTCAGCAGGACTTAGGATTTGGGTTTACAGCGGAGACACAGATGGTAGGGTGCCAGTGCTGTCCACAAGGTACAGCTTAAGTTCTCTAGCTTTGCCTGTCACTAAGCCATGGAGACCTTGGTACCATGAAAATGAGGTTAGCGGTTGGTTTGAAGAATATCAAGGGCTTACATTTGCAACATTTCGAGGAGCTGGCCATGCAGTTCCCTGTTTCAAACCAAGCAGCTCACTTGCCTTCTTCTCATCTTTTCTCCGTGGAGAATCACCACCTTCTACAAAATAA 1452 0.4394 MDNVTLKLTSLYTFAILLFLSSRPAVSTSRHRPYWRELSSVGDNNGDDLVTNLPGQPPVDFRHYAGYVTVNETNGRALFYWFYEAMTKPEEKPLVLWLNGGPGCSSVGYGATQEIGPFLVGTDGHGLKLNNFSWNKEANMLFLESPAGVGFSYSNKTSDYEQLGDDLTANDAYTFLHNWFLKFPSYRTRTFYIAGESYAGKYVPELAELIHDRNKDPYLHIDLKGILLGNPETSDPEDWMGLVDYAWSHAIISDETHKTIKTSCEFNSSDPWRNEDCSDAVDEVLKQYHEIDIYSLYTSTCFASTARSSNGQSMKTSTKRSSTMMPRMMGGYDPCLDDYAKAFYNRPDVQKALHAGDGHNLKNWSICNNDMFNGWADSKPSVIPIYRKLISAGLRIWVYSGDTDGRVPVLSTRYSLSSLALPVTKPWRPWYHENEVSGWFEEYQGLTFATFRGAGHAVPCFKPSSSLAFFSSFLRGESPPSTK* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1518 483 PANTHER CARBOXYPEPTIDASE 10 480 - -
Dod04g1518 483 Gene3D - 382 476 - -
Dod04g1518 483 Gene3D alpha/beta hydrolase 45 303 IPR029058 -
Dod04g1518 483 Pfam Serine carboxypeptidase 54 476 IPR001563 GO:0004185|GO:0006508
Dod04g1518 483 ProSitePatterns Serine carboxypeptidases, serine active site. 193 200 IPR018202 GO:0004185
Dod04g1518 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 143 153 IPR001563 GO:0004185|GO:0006508
Dod04g1518 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 446 459 IPR001563 GO:0004185|GO:0006508
Dod04g1518 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 130 142 IPR001563 GO:0004185|GO:0006508
Dod04g1518 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 179 204 IPR001563 GO:0004185|GO:0006508
Dod04g1518 483 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 10 480 IPR001563 GO:0004185|GO:0006508
Dod04g1518 483 SUPERFAMILY alpha/beta-Hydrolases 46 477 IPR029058 -
Dod04g1518 483 Gene3D - 335 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1518 Dod-Chr4 37013543 37018107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1518 340 477 Calmodulin-binding Proteins AT2G22960 33.094 2.92e-16 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1518 K16297 - gmx:100815993 859.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1518 04 37013543 37018107 Dod03g0377 03 4471701 4475347 PCT