Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1517 ATGGACAGCACAGATTCATCATCTGCAGGGTCTCAGCTGCATCCTCAGCTCCCACCTGGGTTTCGGTTCCACCCCACAGACGAGGAACTGGTCGTTCACTACCTCAAGAGAAAAGCCGCATCTGCACCCCTTCCTGTGGCCATCATCGCAGAGGTTGATCTCTACAAGTTCGACCCCTGGCAACTCCCAAGTAAGGCAGCGTTTGGTGATCAAGAGTGGTACTTTTTTAGTCCAAGGGATAGAAAGTACCCGAATGGGGCGAGGCCAAACAGGGCTGCTACTTCTGGGTATTGGAAAGCTACTGGAACAGACAAGCCCATACTAACATCCGATGGGAACAAGAAAGTTGGAGTGAAGAAAGCACTTGTTTTCTATGGTGGGAAGCCTCCAAAAGGGGTCAAAACCAATTGGATTATGCATGAGTATAGGCTTGTCGATAATTCCTTCAATTCTGGCTCAAAGCCTCCTTCTCTGGCCGCCGATCCACTACATACCAACAAGAAGAAGAATTCCCTCAGGCTTGATGATTGGGTTTTGTGCCGAATATACAAGAAAAGCAACAACACCACCCTTCCAAGGCCACCGCTGACGATGATGGATCATGACAGTAAGGAGCTAATTTCTATGGAGACCATGGTGCCAACCATGTCAACTTTGTCAATGGCCAAGCCCCCATCTCCGAGAAGCACGAGTTATGGACCGATGATGGGACTTGAAAACGATGACAACTTCTTCGATGGGATCTTGGCAGCAACAACTGATCATCAGAGCATTCGAAATGGGTCTCCAGGGTCGTCTTCTAATTCAAGCAAGCGAATATTCCATGGTGATCTCAATAGTGGAATTAGCAGCACTGCTCATGAGGAAAACAATTCCTTCGTTTCCCTGCTTAGCCAGATTCCTCAGAGTGCAACATTTCAGCCGAATGCGATTCTTGGGTCTGTTGGGGATGGTGTGCTGAGGCAACAATTTCAACTTCCCGGCATAAATTGGAACTAG 999 0.4825 MDSTDSSSAGSQLHPQLPPGFRFHPTDEELVVHYLKRKAASAPLPVAIIAEVDLYKFDPWQLPSKAAFGDQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILTSDGNKKVGVKKALVFYGGKPPKGVKTNWIMHEYRLVDNSFNSGSKPPSLAADPLHTNKKKNSLRLDDWVLCRIYKKSNNTTLPRPPLTMMDHDSKELISMETMVPTMSTLSMAKPPSPRSTSYGPMMGLENDDNFFDGILAATTDHQSIRNGSPGSSSNSSKRIFHGDLNSGISSTAHEENNSFVSLLSQIPQSATFQPNAILGSVGDGVLRQQFQLPGINWN* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1517 332 SUPERFAMILY NAC domain 9 185 IPR036093 GO:0003677|GO:0006355
Dod04g1517 332 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 269 - -
Dod04g1517 332 Gene3D NAC domain 26 190 IPR036093 GO:0003677|GO:0006355
Dod04g1517 332 MobiDBLite consensus disorder prediction 1 21 - -
Dod04g1517 332 ProSiteProfiles NAC domain profile. 17 185 IPR003441 GO:0003677|GO:0006355
Dod04g1517 332 PANTHER NAC TRANSCRIPTION FACTOR 56 1 269 - -
Dod04g1517 332 Pfam No apical meristem (NAM) protein 18 144 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1517 Dod-Chr4 36997865 37000117 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1517 1 332 NAC Transcription Factor Family AT1G61110 55.043 2.74e-115 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod04g1517 NAM 4.5e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1517 - - gmx:100797132 473.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1517 04 36997865 37000117 Dod03g0381 03 4600850 4602851 PCT