Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1516 ATGGCAGGGGAAATGGCGAGTGAGATAGTGGACTCTGAAAGCCAAAGGGTACAGTCAGCAGAAGGAAAACCAAACATCTATGTCAAAGTTAATCCACCTGTTACCCTCAAGTTTGAAGATGTTGTACATGAAGCCAAAATTAGCAAAAGCGAATGCTTATTCTGCAAAAAGGAGGTAGGTTCTGGGGATAGAGATAGACTGATCTTGAAAGGTGTTAGCGGTGCCGTTTTTCCAGGTGAATTGTTAGCCATTTTAGGCCCTTCAGGCGGTGGCAAAACAACCCTGATAAACGCTTTGGGAGGCCGGCTACATCGTATCACCAGAGGAAGCATAACCTACAATGGCAAACCCCTCTCAAAATCAGTGAAGCAAAACTTGGGATTTGTTGCCCAACAAGATGTGTTCTATCCTCACCTATCAGTCAATGAGACACTGGTCTTCTCTGCTCTTCTTCGCTTGCCGAATAGCCTCTCTAAACAAGAGAAAATCTCACATGCTGAAGCAGTTATGAATGAACTTGGCCTGACTCACTGTAAAGACACTGTAATGGGAGGGCCACTCCTAAGGGGTGTTTCAGGTGGAGAAAGGAAGAGGGTCAGCATAGGGCAAGAACTGTTGACTAATCCAAGTCTCTTGCTTGTTGATGAGCCAACTTCAGGTCTTGACTCGACCACTGCAAGGAGAATTGTGCTAACACTCTGTGAGTTAGCCAAAGCTGGAAGGACTGTCATAATGACTATCCACCAGCCTTCCAGTAAGCTCTTTTACATGTTTCAGAAGATTTTGCTGTTATCAGATGGTAGTAGCCTGTACTTTGGGAAGGCAGAATGTGTCATGAATTACTTCTCCAGCATTGGATTTGCCCCATCTGTAGCCATGAATCCTACAGATTTCCTACTTGATCTTGCAAGTGGTATATATGCTGGAAATTCAGAAGAGGATGCTAAATCTACAAAACAAGTCCTATTATCGGCATTTGAAAATAACCTTGCATGCCAAGTGAAGATGGAGCTTCAGAATTCCAGGGTTGCATTTCATGACAGTTCGGAAGATGAGATATCTGGCCAGTGTTGCACAACTTGGTGGCAGCAGTTTACTATACTACTGAGAAGGGGTTTCAAAGAAAAAAAGTATGAGCAATTTGCAGTCCTCAAAATCGTCAAAGTTTTGGCCGGATCACTCATTGCGGGCCTTACCTGGTGGCAGTCCAGTCCTGATCAAATGCAAAACCTGGTGGCACTACTTTTCTACTATACACAATTCTGTGGATATTTTTCTATGGTACAATCTATCTTCACGTTTCCTGATGATCACGAAATGCTAATAAAGGAAAGATCTTCCTACATGTATAGTCTCTCAGCTTACTTCATAGCAAGTAATGTTGTTGACCTTCCTGCACAGATAGCCTTGCCAACCCTTTTTATCACCATTACTTATTGGATGGGAGGGCTAAAAGCCAATGCCTTGATTTTCTTCCAAACTCTAGCTGTTGTTCTTCTCTATAGCTTGGTATCACAGGGTATTGGGCTTGCTATTGGCGCACTGCTGGTGAAAAATCAAAGCGTGGCTTCTACAGTTGGAGCTGTAGTCACGACTTTGTTTCTTCTAGCCAATGGCTTTCTTGTTCAACATATAGCAGCATTTCTGTCCTGGATAAAGTACATATCTCATTGCTATTATTCCTTTAAGCTCTTGCTGAGGACACAGTTTAAGGATGATGACAGTTACCCATGTGGTCAAAATGCCACCTGCTTAGTCAGGAATTATCATGTAATTAAGCATGTAGGCCTTGACAAGCAAGGTTTATCTGTTGTTGCCTTGGTGGCGATGTTTGTTGGGTACAGACTTATTGCTTATTTTGGCCTTATGGTTGTTTTGAAACATAACTAG 1890 0.428 MAGEMASEIVDSESQRVQSAEGKPNIYVKVNPPVTLKFEDVVHEAKISKSECLFCKKEVGSGDRDRLILKGVSGAVFPGELLAILGPSGGGKTTLINALGGRLHRITRGSITYNGKPLSKSVKQNLGFVAQQDVFYPHLSVNETLVFSALLRLPNSLSKQEKISHAEAVMNELGLTHCKDTVMGGPLLRGVSGGERKRVSIGQELLTNPSLLLVDEPTSGLDSTTARRIVLTLCELAKAGRTVIMTIHQPSSKLFYMFQKILLLSDGSSLYFGKAECVMNYFSSIGFAPSVAMNPTDFLLDLASGIYAGNSEEDAKSTKQVLLSAFENNLACQVKMELQNSRVAFHDSSEDEISGQCCTTWWQQFTILLRRGFKEKKYEQFAVLKIVKVLAGSLIAGLTWWQSSPDQMQNLVALLFYYTQFCGYFSMVQSIFTFPDDHEMLIKERSSYMYSLSAYFIASNVVDLPAQIALPTLFITITYWMGGLKANALIFFQTLAVVLLYSLVSQGIGLAIGALLVKNQSVASTVGAVVTTLFLLANGFLVQHIAAFLSWIKYISHCYYSFKLLLRTQFKDDDSYPCGQNATCLVRNYHVIKHVGLDKQGLSVVALVAMFVGYRLIAYFGLMVVLKHN* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1516 629 SMART AAA_5 78 268 IPR003593 -
Dod04g1516 629 Pfam ABC-2 type transporter 248 317 IPR043926 GO:0140359
Dod04g1516 629 ProSitePatterns ABC transporters family signature. 191 205 IPR017871 GO:0005524
Dod04g1516 629 Gene3D - 56 285 IPR027417 -
Dod04g1516 629 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 17 626 - -
Dod04g1516 629 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 64 284 IPR027417 -
Dod04g1516 629 Pfam ABC transporter 69 219 IPR003439 GO:0005524
Dod04g1516 629 Pfam ABC-2 type transporter 363 570 IPR013525 GO:0016020|GO:0140359
Dod04g1516 629 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 36 291 IPR003439 GO:0005524
Dod04g1516 629 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 17 626 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1516 Dod-Chr4 36981895 36984513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1516 65 252 Calmodulin-binding Proteins AT2G36910 30.102 7.68e-14 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1516 K05681 - gmx:100800295 922.924