Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1494 ATGAGTTGTGGCTGCTTTGGAGCCTCAACTCTCAAGAAGAAAAGGAGTCCTCCTCATACCCCCAATGAAATTGATGGCTATCCACTTGATAATGTCAGACATTTTTCTGATAAAGAACTGAGATTGGCTACTGATAATTATCATCCAAGCAATAAGATAGGACGAGGAGGTTTTGGAACTGTTTACAAGGGAACCTTACGAGATGGGAGACAGGTAGCAGTGAAGACCCTTTCAGCTGGGTCAAGGCAGGGAGTTCGTGAATTTTTAACTGAAATTAAAACCATATCAAATGTTAAGCATCCAAATCTTGTTGAATTGGTTGGTTGCTGCATTCAAGGACCTAATCGTATATTAGTCTACGAGTATGTGGAGAACAACAGCCTTGATCGTGGATTACTTGGCACAGGGAGTACAAGCATCAGACTAGACTGGAGAAAAAGAACAGCTGTATGCATGGGTACTGCTAGGGGTCTTGCATTTCTTCATGAAGAACTTGTGCCACACATTGTGCACAGAGACATCAAAGCTAGCAACATACTACTTGACAGAGACTTTTATCCAAAAATAGGAGATTTTGGGTTGGCTAAATTATTTCCAGATGACATCACTCACATTAGCACGAGAATTGCTGGAACAACTGGTTACCTGGCGCCTGAATATGCAATGGGTGGCCAGTTAACCTTGAAGGCAGATGTTTACAGTTTCGGGGTTCTAATATTGGAAATAGTTAGTGGCAAGAGCAGTTCAAGGACAAACTGGGGAGGATCTTACAAATTCCTCTTGGAATGGGCCTGGCAACTTCATGAAGAGGGGAGACTATTGGAGCTTGTGGATCCAGACATGGGAGAATATCCTGAGGAAGAGGTGACCAGGTACATGAAGGTAGCTTTCTTCTGCACACAGGCAGCAGCAAGCAGGAGGCCATTGATGTCCCAGGTTGTTGATATGCTGTCAAAGAAAATCAGGCTGAATGAGAAGCAACTCACAGCACCAGGGTTCTTCCAGGACTCAGGAGAGTCCTCTCTAAAGAAGTCATCCTTTGAGTCTACAAGCTATCAATTTAGCTCTAATCCTGTCACTTTTACTCAGGTGGACCCACGCTGA 1104 0.4384 MSCGCFGASTLKKKRSPPHTPNEIDGYPLDNVRHFSDKELRLATDNYHPSNKIGRGGFGTVYKGTLRDGRQVAVKTLSAGSRQGVREFLTEIKTISNVKHPNLVELVGCCIQGPNRILVYEYVENNSLDRGLLGTGSTSIRLDWRKRTAVCMGTARGLAFLHEELVPHIVHRDIKASNILLDRDFYPKIGDFGLAKLFPDDITHISTRIAGTTGYLAPEYAMGGQLTLKADVYSFGVLILEIVSGKSSSRTNWGGSYKFLLEWAWQLHEEGRLLELVDPDMGEYPEEEVTRYMKVAFFCTQAAASRRPLMSQVVDMLSKKIRLNEKQLTAPGFFQDSGESSLKKSSFESTSYQFSSNPVTFTQVDPR* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1494 367 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 363 - -
Dod04g1494 367 SUPERFAMILY Protein kinase-like (PK-like) 30 348 IPR011009 -
Dod04g1494 367 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Dod04g1494 367 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Dod04g1494 367 Pfam Protein tyrosine and serine/threonine kinase 50 317 IPR001245 GO:0004672|GO:0006468
Dod04g1494 367 PIRSF ILK 8 329 - -
Dod04g1494 367 SMART serkin_6 47 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g1494 367 Gene3D Phosphorylase Kinase; domain 1 20 122 - -
Dod04g1494 367 Gene3D Transferase(Phosphotransferase) domain 1 123 332 - -
Dod04g1494 367 PANTHER - 1 363 - -
Dod04g1494 367 CDD STKc_IRAK 53 319 - -
Dod04g1494 367 ProSiteProfiles Protein kinase domain profile. 47 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1494 Dod-Chr4 36581573 36587812 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1494 13 366 Receptor kinase-like Gene Family AT1G56120 50.559 7.77e-114 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dod04g1494 PK_Tyr_Ser-Thr 8.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1494 - - gmx:100788143 646.351