Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1489 ATGTACGTAGCTTCTATGAGAAAGTCTTTCAAGGACTCCTTGAAGGTCCTTGAAGCTGATATCCAGCACGCAAATACCCTGGCGTCAGATTTTCCAAGGGAGTATGATGGTGCATGCCTTCAGATGAGATTGTCATACAGTCCAGCGGCACACCTCTTTCTCTTTTTGGTGCAATGGACTGATTGCCATCTTGCAGGAGCCCTTGGACTGCTAAGGATCCTAATTTACAAGGTGTATGTGGATGGGACAACCACCATGTCTACCCATGAAAGAAAAGCAAGTATCAGAGAGTTCTATGCTGTCATTTATCCCTCTTTAATGCAACTTCAGAAAGGTGTTACTGATATAGAGGATAAGAAGCAAAAGGCTGTATGCATGGAGAGGTATCGGAGAAGAGATGATGAGGAGTACAGGCAGTCTTCTGACATAGACATTGAAAGGGAAGATGAATGTGGAATATGCATGGAGATGAATAGTAAGATTGTGCTGCCCATCTGCAATCACGCCATGTGCCTGAAATGTTACCGAGAATGGCGAACAATCTCGCAGTCATGCCCATTTTGCCGAGACAGTCTCAGAAGAGTGAACTCTGGTGATCTCTGGGTATTCACTGACAGGAGGGACGTAGTAGATATGGCGACCGTGACAAGGGAGAATCTCAGAAGGCTTTTCATGTACATAGATAAGTTGCCTCTGATTGTTCCGGACTCCCTTTTTGACACATATGACTCACACATAAGGTAA 744 0.4476 MYVASMRKSFKDSLKVLEADIQHANTLASDFPREYDGACLQMRLSYSPAAHLFLFLVQWTDCHLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLMQLQKGVTDIEDKKQKAVCMERYRRRDDEEYRQSSDIDIEREDECGICMEMNSKIVLPICNHAMCLKCYREWRTISQSCPFCRDSLRRVNSGDLWVFTDRRDVVDMATVTRENLRRLFMYIDKLPLIVPDSLFDTYDSHIR* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1489 247 PANTHER PEROXISOME BIOGENESIS FACTOR 10-LIKE 3 246 - -
Dod04g1489 247 SMART ring_2 151 188 IPR001841 -
Dod04g1489 247 SUPERFAMILY RING/U-box 140 193 - -
Dod04g1489 247 ProSitePatterns Zinc finger RING-type signature. 166 175 IPR017907 -
Dod04g1489 247 ProSiteProfiles Zinc finger RING-type profile. 151 189 IPR001841 -
Dod04g1489 247 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 106 214 IPR013083 -
Dod04g1489 247 PANTHER RING FINGER PROTEIN 41, 151 3 246 - -
Dod04g1489 247 Pfam Zinc finger, C3HC4 type (RING finger) 148 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1489 Dod-Chr4 36512281 36515632 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1489 K25840 - gmx:100777318 480.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1489 04 36512281 36515632 Dod03g0397 03 4913829 4917574 PCT