Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1476 ATGAAATGGCCCTACGCAAACAAGGACCACAATTGGGCCAGACGCAGATATTCACCCTACCCTAATCTGAGTGTGAGGATGATGCAGGGTGAAGAAGTAAAGAAAGAAGAAGACGATGAAGGTCCCCCACCAGGGTGGCAACCAATTCACACTCCACCACCACCTCCACAGCCACAGCCACAGCCACAGCGACGTTCATCCAATTTGGGTCAAATGGTTTGTGGCTCTTGCCATCGCCTGCTTGCATATCCACGAGGTGCCAAACAGGTCCAATGCGTTAGCTGTCAGACAGTCAACATTGTATTGGAAGCTGATCAGGTTGGGCAAGTTAAGTGTGGGGGCTGTGCAGTATTGCTAATGTACCCATATGGTGCTCCACAAGTTAGGTGTTCCTCATGTCGGTTTGTGACAGAAATTGGGGCACATAATAAGCGTCCTCCGTGGTCTGTACAACAACAAAGGAAGCCAACTCCTCCCAAAACTGTTTGTTAG 492 0.4959 MKWPYANKDHNWARRRYSPYPNLSVRMMQGEEVKKEEDDEGPPPGWQPIHTPPPPPQPQPQPQRRSSNLGQMVCGSCHRLLAYPRGAKQVQCVSCQTVNIVLEADQVGQVKCGGCAVLLMYPYGAPQVRCSSCRFVTEIGAHNKRPPWSVQQQRKPTPPKTVC* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1476 163 PANTHER PROTEIN LSD1 54 158 IPR040319 -
Dod04g1476 163 Pfam LSD1 zinc finger 74 98 IPR005735 -
Dod04g1476 163 Pfam LSD1 zinc finger 112 136 IPR005735 -
Dod04g1476 163 MobiDBLite consensus disorder prediction 29 43 - -
Dod04g1476 163 PANTHER PROTEIN LOL2 54 158 - -
Dod04g1476 163 TIGRFAM LSD1: zinc finger domain, LSD1 subclass 71 101 IPR005735 -
Dod04g1476 163 TIGRFAM LSD1: zinc finger domain, LSD1 subclass 109 137 IPR005735 -
Dod04g1476 163 MobiDBLite consensus disorder prediction 45 62 - -
Dod04g1476 163 MobiDBLite consensus disorder prediction 28 69 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-LSD Dod04g1476 zf-LSD1 7.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1476 - - gmx:100780865 183.341