Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1450 ATGGAGGAGGAGGGTTCAAGTTGGACTTCAGGGTACAAGGAATATGTGGCAGGCTTGCTCGCTGGCGTTGCCACTGTTACCACCGGCCACCCCTTCGACACCGTCAAGGTGAAGCTGCAAAAGCACAACACAGAAGGACATATGATTCAGTACAGAAGTGGATTGCATTGCACTGCTAGGATATTGAAGACTGAAGGACTCAAAGGACTATATAGGGGAGCAACATCATCTTTTGTTGGGATGGCTTTCGAAAGTTCTCTTCTTTTTGGTATTTATTCCCAGACAAAAATGTCCCTTCAGGGGGGTGTGCAAAGTGGTGAACCACAGCCTCAAGTCATAATACCATCTGCAGCTTATGGTGGTGCCATCATCAGTTTTGTGTTATGTCCAACAGAGCTGGTAAAGTGTAGGATGCAGATCCAAGGCACTGACTCTTTGGTTCCAAAGTCCAGTAGATACACTAGTCCCCTTGACTGTGCCCTTAAAACTGTTAAAATCGATGGGGTGACAGGAATTTTTCGCGGAGGTTGTACAACATTGCTTAGAGAATCTTTAGGGAATGCTGTCTTTTTCAGCATATATGAATATGTGCGTTATCACATGCATTCACATGTCAAAGCCGTTTCTTCCAATTACAACAGCATGATTGATATTGGAATTGGGATCGTTACTGGTGGTCTCGCTGGTGTGGGCTTTTGGTTGGCGGTTTTGCCCCTTGACGTCGCGAAGACTTTAATTCAGACAAGCCCAGATAAAAACTGTCCACGAAATCCTTTTCAGGTCTTGAGCTCGATTTACAGGAGGGCTGGATTAAAAGGGTGCTACACAGGGCTGGCTCCTACAGTTACTCGAGCATTTCCTGCTAATGCAGCAGCAATCGTCACCTGGGAACTGGCCATGAAAATTTTAGGCATTAGGCATGACTGA 927 0.4585 MEEEGSSWTSGYKEYVAGLLAGVATVTTGHPFDTVKVKLQKHNTEGHMIQYRSGLHCTARILKTEGLKGLYRGATSSFVGMAFESSLLFGIYSQTKMSLQGGVQSGEPQPQVIIPSAAYGGAIISFVLCPTELVKCRMQIQGTDSLVPKSSRYTSPLDCALKTVKIDGVTGIFRGGCTTLLRESLGNAVFFSIYEYVRYHMHSHVKAVSSNYNSMIDIGIGIVTGGLAGVGFWLAVLPLDVAKTLIQTSPDKNCPRNPFQVLSSIYRRAGLKGCYTGLAPTVTRAFPANAAAIVTWELAMKILGIRHD* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1450 308 ProSiteProfiles Solute carrier (Solcar) repeat profile. 216 302 IPR018108 -
Dod04g1450 308 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 9 135 - -
Dod04g1450 308 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 135 307 - -
Dod04g1450 308 Pfam Mitochondrial carrier protein 8 100 IPR018108 -
Dod04g1450 308 Pfam Mitochondrial carrier protein 116 201 IPR018108 -
Dod04g1450 308 Pfam Mitochondrial carrier protein 222 303 IPR018108 -
Dod04g1450 308 PANTHER - 135 307 - -
Dod04g1450 308 ProSiteProfiles Solute carrier (Solcar) repeat profile. 9 98 IPR018108 -
Dod04g1450 308 PANTHER - 9 135 - -
Dod04g1450 308 Gene3D Mitochondrial carrier domain 2 117 IPR023395 -
Dod04g1450 308 Gene3D Mitochondrial carrier domain 118 308 IPR023395 -
Dod04g1450 308 ProSiteProfiles Solute carrier (Solcar) repeat profile. 108 200 IPR018108 -
Dod04g1450 308 SUPERFAMILY Mitochondrial carrier 9 297 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1450 Dod-Chr4 36108685 36113270 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1450 28 303 Antiporters AT1G79900 29.787 2.59e-35 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1450 K15109 - gmx:100815087 514.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1450 04 36108685 36113270 Dod04g1450 04 36108685 36113270 ECH