Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod04g1449 | ATGCCAGCGCAGAAGCGCTTGCAAGAGGAGCACGACGATGCTCTGCGCGCCGCCGACGAAGCTGAGCAGCCCGAAGATGAAGTCGAATCCGATCGAAGCAACTCTTGGAGCAACGGCGACAAGGAGGAATATGTGATTATAAAATTGTCAGATGTACGCAAGGAAGTTCAGTGCCCTATCTGCCTTGGCATCATTCGAAAAACAAGAACTGTAATGGAATGCCTGCATCGCTTTTGCAGAGAGTGCATAGACAAATCTATGCGCCTTGGTAACAATGAATGCCCTGCTTGCCGTACACATTGTGCTAGCCGACGTTCTCTAAGAGATGACCCAAACTATGATGCCTTGATTGCTGCTCTCTATCCCAATATTGACAAGTATGAAGAGGAGGAATTGGCTTTACATGAAGCTGAGGTCACTCACAATAAACAGATCCAAGCTTCCATTGCCCAGACTCTTCAACGACAGACAGAAGCACTGGGAAAGAAACGGAATGCCAAAGCAACAGCAGTGGCTTTTGTGAGGAGATCACGAGGTAACCATCGAACTTCTCGTTTGAGAAGAAGAAGAAACTTTAGAAATGCAAGTGAACTTCCAGAAGCCAATGACAATGAGGATACGAATGATAATGATGATGAGGGAAAGGGTTCATCTTCTGGCGATGAGCAGACAGAAACCAAAACAAAAAGATGCAAAAGAGAGCAAGAAACACAGTTTCCTCAGCATTCTGCCTCCACCGATGCAGATGTAGCTGGTGAGGAAAATACTCCTGATGTGGATAGAGAGATCATAACTTCATCTGGTACACTTGCCTGGGGAAAGAATGGCCAACGGAGTAACACCCGAGTCAGCAGCGGTAAGAATTCCAAAGGCAGTAGTCCTCTTTCCAAAGGCAGTCCTCTTACCAAAGGCAGTCACACCTCCAGATTGGTTGATCGACTCCATAGCTCTGAAGAAAATGATGACGAGTTGGATATCTTTCTTGCGGTTGTCTCTTTGGATGAGCAAAGAATACCAAGTTTGGAGGAGCCATACCTTCAGTGCAAGCCTACTCTGTCAGTCAGTTCACTGAGCAAGTATGTTGCACTTAAGACTGCGCTGCGGGCTGATGAAGTTGAATTATGCTTGGTAGAAGAGCCGGGAGAGCCGCAATTCAAAATTATAAGAGGAGAAAAAACAGTTGATCCAGACAAAGATAAGTTGCGTGTTCTTGGAGAACAGGAGACGTTGGCTGAACTGAAAAGTTCCAATCTCATCAGAGGTTATCTGCTCATGGCTTATAGGAGGAAGTTGCGGAACTCGCACACCGTTCGCTAG | 1317 | 0.4632 | MPAQKRLQEEHDDALRAADEAEQPEDEVESDRSNSWSNGDKEEYVIIKLSDVRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIAALYPNIDKYEEEELALHEAEVTHNKQIQASIAQTLQRQTEALGKKRNAKATAVAFVRRSRGNHRTSRLRRRRNFRNASELPEANDNEDTNDNDDEGKGSSSGDEQTETKTKRCKREQETQFPQHSASTDADVAGEENTPDVDREIITSSGTLAWGKNGQRSNTRVSSGKNSKGSSPLSKGSPLTKGSHTSRLVDRLHSSEENDDELDIFLAVVSLDEQRIPSLEEPYLQCKPTLSVSSLSKYVALKTALRADEVELCLVEEPGEPQFKIIRGEKTVDPDKDKLRVLGEQETLAELKSSNLIRGYLLMAYRRKLRNSHTVR* | 439 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod04g1449 | 438 | ProSitePatterns | Zinc finger RING-type signature. | 74 | 83 | IPR017907 | - | |
Dod04g1449 | 438 | SUPERFAMILY | RING/U-box | 43 | 129 | - | - | |
Dod04g1449 | 438 | ProSiteProfiles | Zinc finger RING-type profile. | 58 | 98 | IPR001841 | - | |
Dod04g1449 | 438 | CDD | RING-HC_RING1_like | 58 | 98 | - | - | |
Dod04g1449 | 438 | MobiDBLite | consensus disorder prediction | 1 | 38 | - | - | |
Dod04g1449 | 438 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - | |
Dod04g1449 | 438 | MobiDBLite | consensus disorder prediction | 211 | 237 | - | - | |
Dod04g1449 | 438 | PANTHER | OS11G0578200 PROTEIN | 1 | 431 | - | - | |
Dod04g1449 | 438 | SMART | ring_2 | 58 | 97 | IPR001841 | - | |
Dod04g1449 | 438 | PANTHER | OS11G0578200 PROTEIN | 1 | 431 | IPR044592 | - | |
Dod04g1449 | 438 | Pfam | Zinc finger, C3HC4 type (RING finger) | 57 | 97 | - | - | |
Dod04g1449 | 438 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 3 | 128 | IPR013083 | - | |
Dod04g1449 | 438 | MobiDBLite | consensus disorder prediction | 158 | 310 | - | - | |
Dod04g1449 | 438 | MobiDBLite | consensus disorder prediction | 268 | 306 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod04g1449 | Dod-Chr4 | 36094035 | 36098870 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod04g1449 | 51 | 121 | C3H Transcription Factor Family | AT3G23060 | 33.784 | 1.05e-06 | 48.9 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod04g1449 | K10695 | - | zju:107425269 | 434.876 |