Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1443 ATGCTGATGGCGTCTTCGTCTTCTTGTGGGTCTCGCGAGGGACACTACAGAGGGGTCAGGAAGAGACCCTGGGGGCGCTACGCCGCCGAGATACGCGACCCCTGGAAGAAAGCTAGGGTTTGGCTTGGCACCTTCGACACGCCCGTGGAGGCTGCCCTTGCCTACGACGGTGCCGCTCGCTCCCTCCGCGGACCAAAGGCCAAAACCAACTTCCCTCCGCCGCCGGTCGCCGGTGCGGCTGCCGCCGCCGTCCTCGACATCGACGTCCCCACCAGCTGGCCCCCCGCCCCTTCCCGCCGCGTTGTGCTCCGCGAGTTTCTTCAAACTGGCGTTCTCCATGATCATCCGCTGCCTCCTCAGCCCTACACGGCGGTTGTGGCTCACCGCAGAGTAGGTAACGGCAATGGCGGCGGCGGCGGCGGCGGCGGCGGTGACGGCTCCCGTGTGCAGGAGAGTTCTGAGACGGTGTCGTTTCTGGGCGGCGTTGTTGCTCGTGGGCTTCCCATCGACCTCAACGAACCTCCTCCATTGTGGATGTGA 540 0.6574 MLMASSSSCGSREGHYRGVRKRPWGRYAAEIRDPWKKARVWLGTFDTPVEAALAYDGAARSLRGPKAKTNFPPPPVAGAAAAAVLDIDVPTSWPPAPSRRVVLREFLQTGVLHDHPLPPQPYTAVVAHRRVGNGNGGGGGGGGGDGSRVQESSETVSFLGGVVARGLPIDLNEPPPLWM* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1443 179 ProSiteProfiles AP2/ERF domain profile. 15 72 IPR001471 GO:0003700|GO:0006355
Dod04g1443 179 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 12-LIKE 14 81 - -
Dod04g1443 179 PRINTS Ethylene responsive element binding protein signature 16 27 IPR001471 GO:0003700|GO:0006355
Dod04g1443 179 PRINTS Ethylene responsive element binding protein signature 38 54 IPR001471 GO:0003700|GO:0006355
Dod04g1443 179 SMART rav1_2 15 78 IPR001471 GO:0003700|GO:0006355
Dod04g1443 179 Gene3D AP2/ERF domain 15 73 IPR036955 GO:0003700|GO:0006355
Dod04g1443 179 Pfam AP2 domain 15 64 IPR001471 GO:0003700|GO:0006355
Dod04g1443 179 CDD AP2 15 71 IPR001471 GO:0003700|GO:0006355
Dod04g1443 179 SUPERFAMILY DNA-binding domain 15 72 IPR016177 GO:0003677
Dod04g1443 179 MobiDBLite consensus disorder prediction 130 154 - -
Dod04g1443 179 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 14 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1443 Dod-Chr4 36045263 36046074 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1443 5 179 AP2-EREBP Transcription Factor Family AT1G28360 45.361 1.59e-40 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Dod04g1443 AP2 2.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1443 - - cam:101504196 204.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1443 04 36045263 36046074 Dod04g1443 04 36045263 36046074 ECH